Gossypium hirsutum (upland cotton): 107948175
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Entry
107948175 CDS
T04793
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107948175
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107948175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
CLU_N
TPR_2
CLU
TPR_9
TPR_MalT
TPR_8
DUF4533
Motif
Other DBs
NCBI-GeneID:
107948175
NCBI-ProteinID:
XP_040938768
LinkDB
All DBs
Position
A12:81405604..81421623
Genome browser
AA seq
1899 aa
AA seq
DB search
MAPRNSRGKAKGEKKKKEDKLLPLAMDITVHLPDETHVILKGISTDKILDVRRLLSVKTE
TCHVTKFSLSHEVRGPRLKDAVDVSALKPCVLTLTEEDYDEEGAVAHVRRVLDIVACTTC
FGPSATAKDQIKPDASKNAPAAGEKGGVAAKKTAASTNKESLSKSPAKDVPVNIDGEMSH
SRPKLGSFYEFFSLSHLTPPLQFIRRTAKRHVEEIATDDHLFSLEVKLCNGKLVHVEACR
KGFSSVGKQQILCHNLVDLLRQLSRAFDNAYADLMKAFLERNKFANLPYGFRANTWLVPP
IAAQSPSNFPPLPTEDETWGGNGGGLGRDGKSDLIPWANEFSFIASMPCKTAEERQIRDR
KAFLLHSLFVDVAILRAIKAVKHVMEKLNPSSINNDEPLYSKRVGDLNIAVMKDASNASC
KVDTKIDGIQAIGYQKNLLERNLLKGITADENTAAHDISTLGVLNVRYCGYIATVKVERR
DNQQSSYPSQSIELEQPEGGANALNINSLRLLLHKTKPSEPNKPASPSKILEYEEPSSSQ
ISVEGLLEESIAKLEEEELKQEPFVRWELGACWIQHLQEQKNTEKDKKPSREKPKNEMKV
EGLGTPLRSLKNKKKADGNVGSVNSNSHPGAVEKVTGAPMESTLQTNSRDGELVLKSKLS
EEASARLKESDTGLHCKSLQELIDLSQKYYTEVALPKLVADFGSLELSPVDGRTLTDFMH
TRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHVVQAVIATVVNTDKMAESIASAL
NLLLGVPDNGELHKSCRIHSLVWKWLQLFLIKRYEWDISNLDFNEIRKFAILRGLCHKVG
IELVPRDFDMDSPTPFRPSDVVSLVPVHKVINSNHGTFSFFLLKFVSEFVDFIIDLYFIS
FQQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALSKLVAVCGPYHRMTAGAYSLLA
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALQYVKR
TLYLLHLTCGISHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAA
SYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEA
ARNGTKKPDASIASKGHLSVSDLLDYINPNHDAKGKGIVAGKRRSFVMKVKGKVHPESSE
DSPKEAAKEDSDEEKQFSEQEDKPDANQRTSTVPLQPHAPVAEETTEAKINVDNHIHSEL
HAEGDDGWQPVQRPRASASHGGRRLKQRRATIGKVFSYQKKNVDPDVEFPLVKATNQNSR
FYLLKKRTISHGAYTEQHTMSPSQGSKFGRGIIRTVAYRVKSTPSSKSSAKVSGNGGEVL
NPSGGSASTFAPNDLRPTKNSLVSLGKSPSYKEVALAPPGSISKLHIRPETDCHDSQEAP
DRNAEHHQDEINEAKDSFDQVTTGTENISKEKNENALLDSTDSSKEEIDAVETKETRSPS
VMEDNSSLVETEREEGQELEVGGDEAGEVVQDGIYINCMPSSIDSPEKEFSEKDLSPSFE
PHSISSSALQGVEELKEKPLVLTSGNGQGLTNRKLSASAAPFNPSTPIPRAAPCPVNIVL
PPGPGPVPAIAPWPVNMPIHPASPPVLPNPACSSPHHPFPSPPPTPNMMQHLPFMCPPYS
QPQPVPTSTFPLTSSPFHPSQFSWQCNVGPSVPEFIPGTVWPGHPVEFPTTSRIVEPITD
QILEPKIQGDDSNPTSASMLPVDIETIGEAKEEVNISASEAINSADEVSRAGLENLQENG
HLNHCLDNSGNKPSQYNSPNKNAGGSAERKSDDEKTFSILVRGRRNRKQTLRMPISLLSR
PYGSQSFKLIYSRVIRGSEVPKTTGLYLSDNCTASASTT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaggaacagccgtggaaaagccaaaggagagaagaagaagaaagaagataag
cttcttccattagcgatggatattaccgtacaccttcccgatgaaacccatgttattctc
aagggaatatcaacggacaaaatcctagacgttcgtcgtcttttgtcggtaaaaaccgag
acctgccacgtcacaaaattttcgttatctcatgaggttagagggccgcggttaaaagat
gcggtcgacgtttcagcgcttaagccgtgcgttttaactttgacggaagaggactacgat
gaagaaggcgcggtggcgcacgttagacgggtgctggatatcgtggcctgtactacgtgc
tttggtccgtcggccactgccaaagatcagatcaagcctgacgctagcaagaatgcgccg
gctgcgggggagaaggggggtgtcgccgccaagaaaactgccgccagtacgaataaagaa
tctttgtcaaaatctccagcgaaggacgtaccagttaatatagacggcgagatgagccat
tctcgtcctaagcttggctccttctatgaattcttttccctttctcatctcactcctcct
cttcagtttataaggaggacggcgaagcgtcatgttgaggagatcgccactgacgaccat
ctcttctctctagaagttaagctttgcaatggaaagctggttcacgtggaagcttgccgc
aaaggattttctagcgttgggaagcagcagatcctttgtcacaatcttgttgatttgttg
cgccaactgagtagggcatttgataatgcatacgctgatctcatgaaagcatttttggaa
cggaacaagtttgcgaatcttccttatggctttagagccaatacatggcttgtacctcca
atcgcagcacaatcaccttcaaatttcccacctctccctacagaggatgaaacatggggg
ggcaatggaggcggtttaggaagagatggcaaaagtgatttgataccttgggccaatgag
ttttcatttattgcatctatgccttgcaagacagcagaggagaggcagataagggacagg
aaagcattccttcttcacagtctatttgtcgacgtggccattttgagagccattaaggct
gtgaagcatgtaatggaaaagctgaatccaagttcaataaataatgatgaacctctttac
tccaagagagtgggggacttgaatattgcagtaatgaaagatgcttcgaatgcaagctgt
aaggtggacactaaaattgatggtatccaagcaattggatatcaaaagaatttgctggaa
agaaacttattgaaagggatcacagctgatgaaaatacagctgcacacgacatttccact
ttaggtgtgctaaatgtgagatactgtggctatattgccactgtgaaagttgagaggaga
gacaatcagcaaagcagttatccatctcaaagcattgaacttgaacagcctgaaggcggg
gccaatgccctcaatattaacagtttgagattacttcttcacaaaacaaaaccttcagaa
cccaataagccagcttcaccttcaaaaattctggaatatgaagagcctagttcttcccaa
atttctgtagagggtttgctggaagaaagtattgctaaacttgaggaagaggaactcaaa
caggaaccttttgtgagatgggaactcggagcctgctggatacaacatttgcaggaacaa
aaaaacacagaaaaagataaaaaaccatccagggagaagcccaagaacgagatgaaggtt
gagggacttgggacacctcttaggtccctcaagaacaagaaaaaagcagatgggaatgta
gggtctgtaaactcgaattctcatccaggcgctgttgaaaaagtaactggtgctcctatg
gaatctacgcttcaaaccaattcaagagatggtgaacttgtgttgaagagcaagttatct
gaagaggcctctgctcgacttaaagaatcagatactggacttcattgcaagtctttgcag
gaacttattgacttgtcacagaaatattacactgaagttgctcttccgaaattggttgca
gatttcgggtctttggaactctcaccagttgatgggcggacccttactgatttcatgcat
actagaggtcttcagatgcgttctctgggacatgttgtcaagctttccgaaaagctatcg
catgtgcagtcactttgtattcatgagatgattgttcgggctttcaagcatgttgtgcag
gcagtgatagccactgttgttaacactgataaaatggctgaatcaatagcttctgcactg
aacctactgcttggagtccctgataatggagaactacacaagtcttgcagaatccattcc
ctggtgtggaaatggttgcagctcttcttgataaagcgatatgaatgggatattagcaac
ttagatttcaatgaaatcaggaaatttgcaattctacgtggattatgccataaggtagga
attgagttggttccacgggattttgacatggattctcctaccccgttccgaccatcagat
gttgtaagcctggttccagtccataaggtgataaactcaaatcatggaacattttctttc
ttcctcctgaaatttgtttcagaatttgttgattttatcattgatttgtattttatttct
tttcagcaagcagcatgctcatctgctgatggaaggcaacttttagaatcatcaaaaaca
gccttagataagggaaaactcgaagatgcagtgacttatggaaccaaggctctgtcaaag
ctggtagcagtttgtggtccatatcatcgaatgacagctggggcttacagccttcttgct
gtagttttatatcacactggagacttcaatcaggccactatatatcagcaaaaagccttg
gatattaatgagagagaattaggactagaccatccagacacaatgaagagctatggagat
cttgctgtattctattacagacttcagcatacagaacttgctcttcaatatgtaaagcgt
actttgtaccttttacatcttacttgtggcatatctcatccaaatactgccgcaacatat
ataaatgtagccatgatggaagaaggcctgggcaatgttcatgttgccctcagatatcta
cacaaagctctgaagtgtaaccaaaggttacttggtccagaccatattcagacagcagca
agttatcatgctatagcaattgcgctctcattgatggaggcttaccctttgagtgtacaa
catgaacaaacaaccttgcaaattctccgagcaaagctgggccccgatgatttgcgtacc
caggatgctgctgcatggcttgagtactttgagtccaaggcatttgaacaacaagaagct
gctcgaaatggtactaagaagccagatgcatccatagctagcaagggccatctaagtgta
tctgatttgcttgactacattaatccaaatcatgatgccaaagggaagggtattgtggca
ggaaagagaagaagcttcgttatgaaggtgaagggaaaagtccatccagaaagctctgag
gattctcctaaagaagctgcaaaagaggattcagatgaagagaaacaattctctgaacag
gaagataaaccagatgctaaccagcggactagcactgtacctttgcagccccatgctcct
gttgcagaagagacaacagaggcaaaaataaacgttgataatcacattcattctgaatta
catgctgaaggggacgatgggtggcaacctgtccaaaggccaagagcatctgcttcacat
ggtggacggcgattaaagcagaggcgagcaactatagggaaggtttttagttatcagaaa
aagaatgttgatcctgatgtggaattccctcttgtcaaggccactaatcagaatagtagg
ttttaccttttaaagaaacgaacaatatctcatggagcttatacagagcagcacacgatg
agcccctcccaaggttcaaaatttggacggggaataatcagaactgttgcatacagggtt
aagtccactccatctagtaaaagttcagctaaagtctctggaaatggaggtgaggtgctt
aatccttcagggggatctgcttctacctttgcaccaaatgatctccgaccaacaaaaaat
tctctagtcagtcttgggaaatctccttcttacaaggaagtagctttggctcctccagga
agtatctccaaactgcatatcaggcctgaaactgattgccatgatagccaagaggcccca
gaccgcaacgctgaacatcatcaagatgaaattaatgaggcaaaagacagttttgaccag
gtgactacagggactgaaaacatatctaaagagaagaatgaaaatgctttgttggattca
acagatagttcaaaagaggaaattgatgcggttgaaaccaaagaaactaggtcaccttct
gtgatggaagataattcttccttggtggagactgagagagaggaaggacaagaacttgaa
gttggtggtgatgaggctggtgaagttgtacaggatggcatatacataaattgcatgcca
agttcaattgattctcctgaaaaggaattctctgagaaggatttgtctccaagttttgaa
ccccatagtatttcaagttccgcattacaaggggtagaagaactgaaggagaaacccttg
gtcctaacttccggtaacggtcagggactaaccaataggaagttgtctgcctctgcagct
cctttcaacccatcaacacccattcctcgtgctgcaccatgccccgtgaacatcgtcctt
cctcctggacctggacctgttccagccattgcaccttggccagtgaacatgcctattcat
cctgcatctcctcctgtcttaccaaatccagcatgctcttcccctcaccatccatttcct
tcacctcctccaactccaaacatgatgcagcatctaccctttatgtgtccaccctattct
caaccccaacctgtaccaacaagcacctttcctctaactagcagcccttttcaccccagt
caattttcatggcagtgcaatgtgggccccagtgtaccggagttcattccggggacagtt
tggcctggtcatccagtggagtttcccacaacatcacggattgttgagccaattactgat
cagatattggaaccgaaaatccaaggtgatgattctaaccctacttcagcttcaatgctg
ccggtagatattgagactattggagaagctaaggaagaagtcaacatttcagcatctgaa
gcaataaatagtgctgatgaagtatctagagctgggttggaaaacctgcaggaaaatggt
cacttgaaccattgtctagacaactctggaaataaaccaagtcaatacaacagcccaaac
aaaaatgctggaggcagtgctgaaaggaagagtgatgatgagaaaaccttcagcatttta
gtaagaggtagaaggaaccgaaagcagacgttgagaatgccaatcagtttacttagtcga
ccatatggctcgcagtcttttaaacttatatacagcagagttatcagagggagtgaagtt
ccaaaaactactggcctttatttgagtgataattgtacagctagtgcctcaaccacatag
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integrated database retrieval system
