KEGG   Gossypium hirsutum (upland cotton): 107948177
Entry
107948177         CDS       T04793                                 
Name
(RefSeq) LOW QUALITY PROTEIN: replication stress response regulator SDE2-like
  KO
K25059  replication stress response regulator SDE2
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107948177
   03032 DNA replication proteins [BR:ghi03032]
    107948177
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107948177
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Complex C specific factors
    107948177
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107948177
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107948177
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin
Other DBs
NCBI-GeneID: 107948177
NCBI-ProteinID: XP_040938756
LinkDB
Position
A12:81347143..81350347
AA seq 449 aa
MEDHRISKDDISNNNNNVNPRQLQLFVKLVNGQTLSLQFSSPQVQVGSVKRQIQEITKIP
INFQRLIRGHQLKDDSVISHPDATLNLSFSLLGGKGGFGSLLRGAATKAGQKKTINFEAC
RDMSGRRLRHVNXEKRLEAWKAEEEERKLEKMAEDFIKKKAKNGKKGVGDGEAEKYVAKY
REQSARCVAVVEESVKAACLGKRKAVPGGADPKRLKIWMGKRKLNESDSDNGSDDEDSED
DEEAEKSVVLNNGNNSDSSKGTEGSSGSVYKRRSDVEFSGGVSSESGSEEEKDIFPLQNS
KSGGEDVLNVENDKVEVEAMQPEIPENNGTKTEDQKEIVSQGADVPVQENEGVGIKLIDR
VNGCSDVKSEFHGETVVSNTNVAIPEKPLNFDDFNSPQEMEVLGLERLKSELQARGLKCG
GTLQERAARLFLLKSIPLDKLPKKLLAKK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaagatcatcgaattagcaaagacgatattagcaacaacaacaacaacgttaatccg
aggcaattgcagctattcgttaaacttgtaaatggccaaacgttatcgcttcaattctcc
tccccacaagtccaagtcggttccgtcaagcgtcaaattcaggaaatcacgaaaatccca
atcaatttccagcgcctgattcgcggccatcagctcaaggacgattctgtaatttctcac
cccgatgctaccctcaacctctctttcagccttctcggtggcaaaggaggtttcggatcg
ctgctacgtggcgcagccacaaaggccgggcagaaaaagacgatcaatttcgaggcttgc
cgtgatatgagcggaagaaggctgaggcacgtgaatnnggagaagaggctggaggcgtgg
aaggcggaggaggaagagaggaaattggagaagatggcggaggattttataaagaaaaag
gcgaaaaatgggaaaaaaggggttggagatggagaagccgagaagtatgtggcgaagtac
agggagcaatcagcaaggtgtgtggcggtggttgaagaatccgttaaggcggcgtgccta
ggaaagcggaaggcggttccaggcggagctgaccctaaaaggttaaagatttggatggga
aagaggaaattaaatgagagtgatagtgataatggcagtgatgatgaagatagtgaagat
gacgaggaagctgaaaaatctgtagttttgaacaatgggaataattcggattctagtaag
ggaactgaggggagttccggttcggtttataagagaagatctgatgtggaattctcaggt
ggagtatcgagtgagagtggttccgaggaagagaaagacatttttccactgcaaaactcg
aaatccggtggggaagatgtgctcaatgtagaaaatgataaggttgaagttgaagcaatg
caacccgagataccggaaaataatggaactaaaaccgaagatcagaaggaaatagttagt
cagggtgccgatgttccagttcaagaaaatgaaggagtcgggatcaaattgatagataga
gtcaatggttgttctgatgtgaaatcagaatttcatggagaaacggtagtttcaaacact
aacgtggctatacctgaaaagccattgaactttgatgacttcaattcgccgcaagagatg
gaggttcttgggttggagaggttgaaatcagaactgcaggctcgtggtctaaaatgcggc
ggtactttgcaagaacgagctgctcggcttttcctgctaaagtctatccctttggataag
cttccaaagaagttgcttgcaaagaaatga

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