Gossypium hirsutum (upland cotton): 107948179
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Entry
107948179 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107948179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107948179
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107948179
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107948179
NCBI-ProteinID:
XP_016738134
UniProt:
A0A1U8NJT4
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Position
A12:81327194..81333179
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AA seq
708 aa
AA seq
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MTFRRDKFVRFKDWSSDDGSFTSKVRPSFSAVIEGARKLFENGSERVKGLKKPVNFGFSS
KKQPKKDKAVSSKKRTLNPQGDFLQNWNKMFLLSCAIALAIDPLFFYIPVVKANLKCLDL
DNKLGVVASVLRTLIDAFYAIHIVFQFRTAFIAPSSRVFGRGELIEDSWAIAKRYLFKNF
FIDILAILPLPQLVVIIIKSSLKGSVSEITKDLLKTFIFIQYVPRILRIVPLFKEVTTTS
GILTKSAWTGAALNLFLYMLASHAVGAFWYLFSIERQDRCWRNAVNGDVAALYCHKSITR
NETLVNMLNTTCSLINPDDLKDPKHFNFGIFFDALESGVVETMDFPMKFLYCFWWALRNL
SSFGQNLKTSTYVWEILFAIAIAIGGLILFSLLIGNMQKYLESTGVRVEEMRVKRQDAEQ
WMSHRMLPENLRERIRRYEQYKWQETRGVEEEALIANLPRDLRRDIKRHLCLDLLKRVPM
FDKMDEQLLDAMCDRLKPVLYTDKSYILREGDPVEEMLFIIRGNLTSTTTNGGRTGFFNS
AHLKAGDFCGDDLLTWALDPQSSSNLPISTRTVQALKEVEAFALMADDLKFVASQFRRLS
SKQFMHTFKFYSVRWQTWAASFIQAAWRRHCRRKQVKSLREAEGEPLAALANGNETSPSL
GATLYASKFAVNALRTLRSHGSQSSPRLPQRLSPLLPQKPAEPDFTAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgactttccggcgagacaaatttgtaagattcaaagattggagctcagatgatggatca
tttacatcaaaagttagaccatcattcagtgctgttatagagggtgcccggaaactgttc
gagaatggttccgaacgagttaaaggcttaaagaaaccagtgaatttcgggttttcgagt
aaaaaacaaccgaagaaagacaaggcagtgagttcaaagaagaggactcttaatccacaa
ggagactttcttcaaaactggaacaaaatgttccttctttcatgtgccattgctctagct
attgatcctttgttcttttacatccctgtggttaaggcaaatttgaaatgcctcgacttg
gacaacaaactcggagtcgttgctagtgtccttcgtactttaatcgacgctttttacgcc
attcatatcgtgtttcaattccgtaccgcattcattgccccgtcgtcgcgtgtattcggt
agaggcgagttgattgaagattcttgggctatcgcgaaacggtatttgttcaagaacttc
ttcatcgatattctcgctatcttaccacttccacagctggtggtcataattataaaatca
tcattgaaaggctcggtttcggagatcacgaaagatttgttgaaaacctttattttcatc
caatacgtgccgagaatccttcgaatcgttcctcttttcaaagaagttacaaccacttcc
ggcatattaaccaaatcggcatggaccggtgctgctttgaatctcttcctatacatgtta
gctagtcatgcagttggagccttttggtacttgttttcgatcgaacgacaggaccggtgt
tggcgtaatgctgtaaatggcgacgtagccgcgttgtactgtcataaaagcataacacgt
aacgagacattagtgaatatgctgaatactacctgctcattaatcaatcctgacgacttg
aaagatccgaaacacttcaacttcgggatatttttcgatgcactcgagtccggtgtggtg
gaaaccatggattttcctatgaagttcttgtactgcttttggtgggctttgcgtaatcta
agttcttttggccaaaatctcaaaacaagtacctatgtgtgggagatattgtttgccatt
gccattgccattggtggcttgattctgttttcactgctcattgggaacatgcagaaatat
ctagaatcaacaggggtgagagtggaggaaatgagggtgaaaaggcaagatgcagagcaa
tggatgtcacaccggatgctaccggagaaccttagggaacgtataaggcgatatgaacag
tacaaatggcaagaaaccagaggtgttgaagaagaagccctcattgctaatcttcctagg
gatctcagaagagatataaagagacatctttgcttggatcttctcaaaagagtgccaatg
ttcgacaaaatggatgaacaactattagatgcaatgtgtgatcgtctcaaaccagtgctt
tacaccgacaaaagctatattctccgagaaggtgatcctgtggaggagatgctgtttatt
atccgagggaatctgacaagtacgaccacaaacggcggaagaaccggtttcttcaactct
gctcatctcaaagccggtgatttttgcggcgacgatctgctcacatgggcattggatccc
caatcatcgtcgaacctaccgatctcgacgagaacagtgcaggccttgaaagaagttgaa
gcttttgctttaatggcggatgatttgaaattcgtggcttctcagtttcgacgtcttagc
agcaagcaattcatgcatactttcaagttctactcggtgagatggcagacatgggcggcg
tcgtttatacaagcagcttggcgccgacactgcaggaggaagcaggtaaagtcactacgt
gaagccgagggagagccgcttgcagctctggcaaacgggaacgaaacctcaccaagcctc
ggcgccacgctttacgcttcaaaatttgccgtcaatgcgttacgaacgttgcggagccat
ggctcgcaaagcagccctagattgcctcaaagattgtcgccgttgcttcctcaaaagcca
gccgagcctgattttacggctgaataa
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