Gossypium hirsutum (upland cotton): 107948370
Help
Entry
107948370 CDS
T04793
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107948370
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107948370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
PspA_IM30
CREPT
CTK3
Motif
Other DBs
NCBI-GeneID:
107948370
NCBI-ProteinID:
XP_016738374
UniProt:
A0A1U8NKI0
LinkDB
All DBs
Position
D04:15430950..15435171
Genome browser
AA seq
524 aa
AA seq
DB search
MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPNALRDVIENGDEFGRNAALRLIRIWEERKVFGS
QGQILKEELVGRQSENNNRNGRHVGVKLQKQPVRNTVDKIVSAYQVVYGSQMDEDVIFSK
CRNAISCIDKVDKEIGTDVNTGQFRGSALVEEVQGQHAVLRDCIQQLTAVASSRASLVSH
LREALQEQEFKLEQVRAELQVAQSRSEHAGNICGQFLNIDNPELVAEQSSKEPQTSIAPQ
SFIPSATEQSAPVMYARQASFPDNSGRNEEDPRKSAAAAVAAKLTASTSSAEMLSYVLSS
LASDGVIGNPMKDSSGDYPSEKRSKRENDQSYIPSQNPQQASVPPFSHPESHQHNVVTTT
QQLALNEVPPPPSSSPPPLPPLPPMPPYAVPQYMPTAGSINGVTYSYSMTSQQPSLPGYS
IAGAAMSGISLFATSSTNSYQSFQSSEGFHNQPSSLPTAPISRQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggcagttcatttaatgctcaaatcttggtggaaaagctagccaagcttaataactca
caagcgagcatagagactttatcacattggtgtattttccatatgaataaggcaaaacaa
gttgttgaaacttgggacagacaatttcattgctccccacgcgagcagagattggccttt
ctgtatcttgccaatgatattttgcagaatagcaggcgtaagggttcggaatttgttggt
gaattttggaaggttcttcctaatgctcttcgtgatgtgattgaaaatggagacgagttt
ggaaggaatgctgcattgcgtttgatccgtatatgggaagagagaaaagtatttggttct
cagggacaaattctcaaggaagagcttgttggcagacaatcagaaaacaataatagaaat
ggcaggcatgtaggtgtaaagctgcagaagcaacctgttagaaatacagtggacaaaata
gtgtcagcctatcaagttgtttatggtagtcagatggatgaagatgttatattcagcaaa
tgtaggaatgctattagttgtatcgataaagtagataaagaaattggtactgatgtcaat
acagggcagttccgtggatctgcacttgtggaggaggtccagggtcagcatgctgtattg
agggattgtattcagcagctaacagctgttgcatcatcaagagctagtctagtctcacat
ttgagagaggctcttcaggagcaggaattcaagttggagcaagttcgtgctgagcttcag
gtggcacagtcccgatcggaacatgccggtaacatctgcggacaatttttaaatattgac
aatcccgagttggtagctgagcaaagttcaaaggaacctcaaacatctattgcacctcaa
agttttattccatcagctacagagcaatcagctcctgtgatgtatgcccggcaagcatct
tttcctgataattctggccgcaatgaggaagatcctcggaaatctgcagctgctgcagta
gcagcgaagctaactgcatcaacatcctctgcggagatgctttcctatgtcttgtcttcc
cttgcttctgacggtgtcatcggtaatcctatgaaagactcgtctggtgattacccttct
gagaagagatctaagcgtgagaatgaccagtcttacataccatctcagaatcctcaacaa
gcctcagttccaccattctcgcatcctgaatcacaccaacataatgttgtgaccaccacc
cagcagttggctctaaatgaggtgccacctcctccatcatcgtctcctccacctctgcca
ccactgccgcctatgccaccgtatgctgtgccccagtacatgccaactgctggatcaata
aatggggtgacatatagctatagcatgacatcacagcagccttccttgcctggttattcc
atagctggagctgcaatgagtggcatctccttatttgccacatcatcaactaattcttac
cagagtttccaaagctctgaaggttttcataaccagccgtcatccttgccaacggcacct
atttctcgacagtag
DBGET
integrated database retrieval system
