KEGG   Gossypium hirsutum (upland cotton): 107948423
Entry
107948423         CDS       T04793                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03060  Protein export
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    107948423
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ghi02044]
    107948423
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     107948423
Secretion system [BR:ghi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   107948423
  Eukaryotic Sec-SRP protein
   107948423
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 CLP1_P APS_kinase AAA_17 cobW NTPase_1 AAA_16 AAA_30 nSTAND3 KAP_NTPase NPHP3_N AAA_18 ParA ArsA_ATPase ATP_bind_1 ResIII AAA Thymidylate_kin AAA_33 NB-ARC AAA_14 AAA_31 AAA_24 6PF2K SRPRB TctA NACHT AAA_19 SLFN-g3_helicase nSTAND6 TsaE PIF1 KTI12 GTP_EFTU MobB Vps23_core ATPase_2 BRCC36_C RNA_helicase AAA_25
Other DBs
NCBI-GeneID: 107948423
NCBI-ProteinID: XP_016738451
UniProt: A0A1U8NHD3
LinkDB
Position
A04:complement(51796459..51802496)
AA seq 565 aa
MQISTTASRLFSATLVPFSTNRSPTKPTKLATSCAPSASTNLASLSSRNLFTREIWGWVN
SKTATSRREMRGVVRAEMFGQLTSGLEAAWTKLKGEEVLTKENIVEPMRDIRRALLEADV
SLPVVRRFVQAVSDQAVGVGLIRGVKPDQQLVKIVNDELVKLMGGEVSELVFSKSGPTVI
LLAGLQGVGKTTLCAKLANYLKKQGKSSMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGT
EVKPSEIAKQGLEEAKKKKIDVVIMDTAGRLQIDKGMMDELKEVKKVLNPTEVLLVVDAM
TGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEP
FYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVARMG
SMTRVIGMIPGMGKVTPAQVREAEKNLKLMEAMIEAMTPEEREKPELLAESPDRRRRIAK
DSGKTEQQVSQLVAQLFQMRVRMKNLMGIMEGGSIPTLSNLEDAMKAEQTAPPGTARRKR
RSESRRQFADSASTRPSPRGFGAKN
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgcaaatttcgactactgcttcccgcctcttctcggcgactttggttccattttcgacc
aaccgcagccccacaaaacctactaaacttgccacttcatgcgccccctccgcttccacc
aatttggcttccctttcttccaggaacttgttcactagagagatatgggggtgggtaaat
tccaagacggccacttctaggagggaaatgcgaggtgttgtaagagctgaaatgtttggc
caactcaccagtggtctcgaagctgcttggaccaagcttaaaggagaagaggttttgaca
aaggagaacattgtggagccaatgcgtgatattaggagagcgcttctggaagcagatgtg
agtcttcctgttgttagaaggtttgtccaagctgtaagtgaccaggctgttggagttggc
cttattagaggagtaaagccggatcaacaattagttaagattgtaaacgatgagcttgtg
aaactgatgggaggagaggtttctgaactggtcttttcaaaatctggccccactgttata
ttattggctggtctacaaggggttggaaaaacaactctttgtgccaagttagctaattat
cttaaaaagcagggtaagagcagcatgcttattgcaggagatgtatacagacctgctgct
attgaccaacttgttattttgggtgaacaggtaggtgttcctgtttatacagcagggact
gaggttaaaccatccgaaatagcaaagcaaggcttagaagaggccaaaaagaagaagata
gatgtagtgataatggatactgcaggaaggctgcagatagataaaggaatgatggatgag
ttgaaagaagtgaagaaagtattgaatcccacagaagttttgcttgttgtggatgcaatg
actggccaagaagctgctgcgttggtcacaacattcaatgttgagataggcattactggt
gccattttgacaaagctagatggggattctcgaggtggtgcagccttgagtgttaaagag
gtgtctgggaagccaatcaagcttgtaggacgtggagagcgcatggaggacctagagcct
ttctatccagaccgcatggctggacgtattttaggaatgggtgacgttctctcatttgtt
gagaaagcacaagaagtcatgcgccaagaagatgctgaagagttgcaaaagaagataatg
agtgcgaagtttgatttcaatgatttcctaaagcagacccgtgctgttgcgcggatgggt
tccatgacccgtgttattggaatgatccctggaatggggaaggttacgccagcccaagtt
cgagaggcagagaagaatttaaagttaatggaggcaatgattgaagccatgacaccagag
gaaagggagaagccggagttattggctgagtctcctgacaggaggagaagaattgctaaa
gattctggtaaaacagaacagcaggtgagtcaacttgttgctcaactcttccaaatgcga
gttcgcatgaagaatttgatgggtatcatggagggtggatctattcctacattgagcaat
ctcgaggatgcaatgaaagcagaacaaacggctcctcctggtacagctagaagaaagagg
agatcggagtcgagaaggcagttcgcagactcggcatcaacaaggccaagccctcgtggt
tttggtgcaaagaactag

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