KEGG   Gossypium hirsutum (upland cotton): 107948496
Entry
107948496         CDS       T04793                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03020  RNA polymerase
ghi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107948496
  09124 Replication and repair
   03420 Nucleotide excision repair
    107948496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107948496
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107948496
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107948496
  RNA polymerase III system
   RNA polymerase III
     107948496
  RNA polymerase I system
   RNA polymerase I
     107948496
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107948496
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 107948496
NCBI-ProteinID: XP_016738554
UniProt: A0A1U8NKZ1
LinkDB
Position
A04:complement(15254894..15258705)
AA seq 145 aa
MSSIILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMA
LAHTLNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLLM
LLRGEASHVSHFELDQRIFLLMRKL
NT seq 438 nt   +upstreamnt  +downstreamnt
atgtcaagcataatacttttcgaggacatttttgtggttgataagcttgacccagatggt
aaaaagtttgataaagttactcgaattgaagcacggagccaaaactgtgacatgttcatg
cacctagatgtgaatacagagatataccccatgcatgttggtgacaaattcacaatggct
ttagctcacaccttgaatttggatggaactcctgacactggctattacactccgggaagg
aagtctcttgctgataagtacgagtatgtcatgcatgggaagctatacaagataacagat
gacgcttcaggcaaaggacttaaagcggagctctatgtttcatatggagggcttctaatg
ctactcaggggagaagcttctcatgtctcccattttgaactcgaccagagaatatttctt
ctcatgaggaagctctga

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