KEGG   Gossypium hirsutum (upland cotton): 107948535
Entry
107948535         CDS       T04793                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03410  Base excision repair
ghi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107948535
   03450 Non-homologous end-joining
    107948535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107948535
Enzymes [BR:ghi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     107948535
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107948535
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     107948535
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f HHH_8 DNA_pol_B_thumb HHH_5 BRCT NTP_transf_2 Cdd1 PTCB-BRCT
Other DBs
NCBI-GeneID: 107948535
NCBI-ProteinID: XP_016738607
UniProt: A0A1U8NHM3
LinkDB
Position
D01:complement(39958225..39976290)
AA seq 526 aa
MAPKRTKRKSPSPDPQGMFAGMTVFLIEDGVQSLRLQIWKQKLVQMGAKVETQLSEKVSH
VFAISSDALFHHVDDDRLARFKGHVLLYQWLEESLAAGEKVSEDFYILKVDPEGFDIFDK
SLKAKLANRNSSSYDEHSHCKRIKSSHEEKKQTNEEKKGDIETNSVSWASNTEPHFPSSL
TNSPEISSTQDKDVGMQMSFQYSPPDLNKGITEIFGKLVNIYRALGDDRRSFSYYKAIAV
VEKLPFKVESADQVKDLPGIGKSMQDHIQEIVTTGKLSKLEQFETDEKVKTITLFGEVWG
IGPATALKLYEKGHRTLDDLKNEDSLTNAQVIGLKYFDDIKTRIPRHEAQEMELVLQKVA
EDIIPGMVVVCGGSYRRGKASCGDLDIVITHPDGKSHKGFLQNYVKRLKEMKLLREDLIF
STHSEEGTDSGVDTYFGLCTYPGRELRHRIDFKAYPRDIYAFGLIAWTGNDVLNRRLRLL
AESKGYRLDDTGFKRYRKSEIGDRRRCLIFWDFHGLNLMKGICKEA
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcacccaagcgaaccaaaagaaagtctccatcccccgatccacaaggaatgttcgcc
ggtatgacggttttcttaatcgaagatggcgtccagtctcttcgtttacagatttggaag
caaaagctggtacaaatgggagctaaggttgagactcagttgtccgaaaaagtcagtcat
gtttttgctatcagctcagatgctctttttcaccacgtcgatgacgaccgattggctcgc
ttcaaagggcatgttcttttgtatcagtggttggaggaaagcttggcagctggtgaaaag
gtttctgaggatttctacattctgaaagtggatcctgaagggttcgatatatttgacaag
agtttgaaggctaaactagccaacaggaattcttccagctatgatgaacattcacattgc
aaaagaatcaaatcctcacatgaggagaaaaaacaaactaatgaagaaaagaaaggggat
atagaaactaactctgtatcttgggcatcaaatactgagccccactttcccagctcccta
actaacagtcctgaaatctctagtactcaagataaggatgttggcatgcaaatgtctttt
cagtacagtccgccagatttaaacaagggcattacagagatatttgggaaacttgtcaac
atatatagagcgctgggtgatgaccgaagatcatttagctactacaaggctattgcagtt
gttgagaagttgccctttaaagttgaaagtgcagatcaggtaaaagatctgcctggaatt
ggaaagtcaatgcaagatcatattcaggagatagtgactaccggaaagttatcaaagttg
gagcaatttgaaactgatgagaaggtaaagacaataactttatttggtgaagtttgggga
attggtccagctacagccctaaaattatatgagaaaggacatcgtacattagatgatttg
aagaatgaagattctttaacaaatgctcaagtgataggattgaaatattttgatgatatt
aagacaaggatcccacggcatgaggctcaagagatggaattagttttacagaaagtagca
gaagatatcatacctgggatggttgttgtatgtgggggatcatatagacgtggaaaagct
tcctgtggagatttagacattgtaattacacatcctgatggaaaaagccataaaggtttc
ctgcaaaattatgtcaagcggttaaaagagatgaagttattaagggaagatttgattttt
agtacccatagtgaagagggtactgattcaggtgttgatacatattttggtctttgcact
tatcctggacgagagctcaggcaccgcatagactttaaggcatatccgagggacatatat
gcatttggactaatagcatggactgggaatgatgtgttaaatagaaggttgagactgcta
gcagaatctaaaggatatagacttgatgatacagggttcaagaggtaccgcaagtctgaa
attggagacagaaggaggtgtttgattttctgggatttccatggcttgaaccttatgaaa
ggaatctgtaaagaagcgtag

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