Gossypium hirsutum (upland cotton): 107948554 Help Entry 107948554         CDS       T04793                                  Name (RefSeq) protein PAT1 homolog 1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03018   RNA degradation Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107948554  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107948554 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      107948554   mRNA degradation factors    5'-3' decay     Decapping complex      107948554 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  107948554 NCBI-ProteinID:  XP_016738630 UniProt:  A0A1U8NID1 LinkDB All DBs Position A07:85147598..85153258 Genome browser AA seq 795 aa AA seqDB search MERSDGKLPINFFQTSSDNAHFDASQYEFFGQNAMEEVELGGLEDGEVEGPVFASIEDDE YHLFDRGDVGSLGSLSDMDDLASTFAKLNRVVTGPRHPGVIGDRSGSFSRESSSATDWAV DGEHLNWMDQHMFETEDSQESKRWSSQPQLTSARFSESKPLYRTSSYPQQLPEPHFSSEP IVEPKPSIFTSFPPPGSRCQQSSPGNLKVPVLTSGSPSPFSAASLSSLSNSSLHLAGLSH GLHFGGNLSQLTSPGPSFSSRSLNHWVNQSGLLHGERAGLLHLMLQQQIPHQNGLLFPQL MSPQQQRMHHSVQPSLAHFAALQSQVYKSHPSHKMMLGLADLREHRTKSSQRNRQSMRLS QQSSDAGSQKSESGLVQFRSKYMTGEEIESILKMQHAATHSNDPYVDDYYHQACVAKRSG SRAKHHFYPSHPKESHSRTRNSGEQHLHHHVDALGKVPLSSIRRPRPLLEVDPPLGSGDG SDQKTERPLEQEPMLAARITIEDGLYLLLEIDDIDRLIQFSQPQDGGAQLKRWRQILLEG MAASLQLVDPLSKGGHAVSCAPKDDIVFLRLVSLAKGRKLITRLLQVLIPGSELMRIVCM TIFRYLRFLFGGLSADLEAAETTNDLAKTVSVCVNGMDLRALSACLVAVVCSSEQPPLRP LGSPAGDGASVIIKSVLERASQLLSHPSGNCSMPNYTLWRASFDEFFALLTKYCVSKYET IIQSIHNQPQPTTEVIGLEAIRREMPCELLRASLPHTNESQRKLLMDFSQRSVSMNGSSS PAGSTSRINSESVRV NT seq 2388 nt NT seq  +upstreamnt  +downstreamnt atggagagatcggatggcaaacttcctatcaacttctttcaaacttcctcagataatgcg cattttgatgcttcccagtacgaattttttggtcaaaatgccatggaagaagtggagttg ggaggtttggaagatggtgaagtggaaggtcctgtttttgcatccattgaagatgacgaa taccatttgtttgatagaggagatgttgggagtttagggtcactatctgacatggatgat ttggctagtacttttgcaaagttgaatagggttgtcacaggaccaagacatccaggagtt attggtgatagatccggttctttttcaagggaaagttcatctgctactgactgggctgta gatggagagcatttaaactggatggatcagcatatgtttgaaacagaagattcccaagaa agcaaaagatggtcctcacagccacaactgacttctgctcgtttttcagaatcaaagcct ttgtatagaacttcgtcatatccccagcagctgccagagcctcacttctcaagtgaacca attgttgagcccaaaccatcaatcttcacatctttccctcctcctggtagcagatgccaa caatcttcacctggcaacctaaaagttccggttcttactagtggatctccgtcacccttt tctgcagcaagcctctcttcattgtccaactccagtcttcatctggctggtctatctcat ggattacattttggtggtaatttgtcccagttaacatctcctggcccatcttttagtagt aggtcgctaaatcattgggttaaccagtctggtctactacatggagaacgtgctggtctt ttgcatcttatgttgcaacagcaaatacctcatcaaaatggcctattgttcccacagtta atgtcacctcaacagcagagaatgcaccattcagttcaaccatctttggcacattttgct gcattgcaatctcaagtttataaatctcatccttcacataaaatgatgcttggactggct gatcttagggaacatcgaactaaatcatcacaaagaaacaggcagagcatgcgtttgtct cagcaaagttctgatgctggtagccagaaaagtgagagtgggttggtacaattcagatcc aagtatatgactggtgaagagatagagagtattctcaagatgcagcatgccgccacgcat agtaacgatccttatgtagatgattattatcaccaagcttgtgttgccaaaagatctgga tccagggctaaacatcatttttacccatctcacccgaaagaatcacattctcgaacccgt aacagtggagagcagcatttgcatcaccatgttgatgcactcgggaaggtccccctctct tccattcgtagaccccgtcctctacttgaagttgatcctcccttgggctcaggtgatggt tctgatcagaaaactgagaggcctctggagcaggaacctatgcttgcagctagaatcacc attgaagatggtctctaccttcttcttgaaatagatgatattgaccggctcatacaattc agtcagccccaagatggtggggctcagctcaaaaggtggcggcagatcttgcttgaaggt atggcagcatcacttcagcttgttgatccgcttagcaaaggtgggcatgcagttagctgt gctcccaaagacgacatcgtgttcctaagattagtctcccttgcaaaaggccggaagctc atcactaggctccttcaggttctcatccctggtagtgagcttatgcgaatagtgtgcatg accattttccgttacttgagattcttgtttggtggtctttctgctgatctggaagcagct gagacaactaatgaccttgcaaagacagtttccgtgtgtgttaatggcatggatcttcgt gcacttagtgcgtgccttgttgcagttgtttgttcttcggagcaaccaccacttaggcct cttggaagccctgctggggatggtgcttcggtgatcataaaatcagttcttgaaagggcc agtcaacttctaagtcatccatctggaaattgcagcatgcctaattatactctctggagg gcttcattcgatgaattttttgcccttcttaccaagtactgtgttagtaaatatgagaca ataatccaatcaatacataaccagcctcagccaaccacagaagtcatcggtttagaggct ataaggcgtgaaatgccttgtgaacttctacgagctagtcttcctcacactaatgaatcc cagaggaagcttttgatggacttttctcagcgttcggtgtccatgaacggatccagttcg cctgctggaagtactagccgaatcaactctgaatcggtaagggtctaa

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