Gossypium hirsutum (upland cotton): 107948576
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Entry
107948576 CDS
T04793
Name
(RefSeq) DNA-3-methyladenine glycosylase isoform X1
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107948576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107948576
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
107948576
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107948576
Prokaryotic type
107948576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
107948576
NCBI-ProteinID:
XP_016738671
UniProt:
A0A1U8NHT4
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Position
A04:32286693..32289725
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AA seq
271 aa
AA seq
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MSLSAPTLLVQMNPTHQFKPVASKSRKTVRSSQCLEGRTSHSSKAVTVRTRTKPSRKQTR
PQSSPVSLPCFRNTTILPPEFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRPNDSAC
HGRFGVTARTAPVFGPGGHAYVYLCCGLHTMLNVVADKEGAGAAVLIRACAPVCGLETIQ
ERRGQQTEKPILLTGPGKVGQALGITTEWSNHPLYTPGGLELLDGPEPDKILIGPRVGIE
YALPEHVNALWRFAIAGSAWISAPKNTLRLS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttcagctccaacacttttggtccagatgaacccaactcaccaatttaaacca
gttgcttcgaaatccaggaaaacagttcggtcgagccaatgcctggaaggacggacgagt
cacagttccaaagcagtgaccgttaggacccggaccaaaccaagccgtaaacaaactcgg
ccgcaatcttctccggtttctctcccttgttttcgcaataccacgatactgcccccggag
ttctttcaaattgacgctcttgatttggcgccacgtttgcttggcaagtttttaaggaga
gatgatgttgttcttcaaatcactgaggtagaggcttataggccaaatgattcagcttgt
catggtagatttggagtcacggcaagaacagcccctgtttttggtcctggagggcatgct
tatgtttatctttgctgtggacttcatacgatgctcaatgttgttgctgacaaagaagga
gctggggctgcagtgttaatacgtgcatgcgctccggtgtgtggtttggagactattcag
gagcgtcgtggtcagcaaactgaaaagcctattcttctcactggacccggaaaggttggt
caggcacttggaattaccacagaatggtctaaccatccactatacactcctggtggtttg
gaactcttggacgggcctgaaccggataagatattaattgggccacgtgttggcattgag
tacgctttacccgagcacgttaacgccttgtggagatttgccattgccggttccgcatgg
ataagtgctcctaaaaatactctcaggctttcctag
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