Gossypium hirsutum (upland cotton): 107948707
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Entry
107948707 CDS
T04793
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107948707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107948707
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
107948707
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
107948707
NCBI-ProteinID:
XP_016738826
UniProt:
A0A1U8NIG3
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Position
A08:complement(127236473..127239904)
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AA seq
199 aa
AA seq
DB search
MKITSLVVLKCNPEGSDPIILANATDLSHFGYFQRSSVKEFIVFVSRTVAKRTPSGQRQS
VQHEEYKVHAYNRNGLCALGFMDDHYPVRSAFSLLNQILDEYQKNFGESWRNAQADSTQP
WPYLNDALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGERLDSLVEKSSDLSA
ASQMFYKQAKKTNQCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacatcgttagtagtgctgaagtgcaacccggaaggatccgatccgataata
ctagcgaacgctaccgatttgagccattttggttacttccaaaggtcaagcgtcaaggag
ttcatcgttttcgtttctcgaactgttgctaaacgtactccttctggtcagcgccaatcc
gttcagcacgaagagtataaggtacatgcttacaacagaaatggactttgtgccttggga
tttatggatgatcattatccagttcgaagtgctttttcgcttctcaaccagattctagat
gaatatcagaaaaattttggggagtcttggagaaatgcacaagctgatagcactcaacct
tggccgtatctgaatgatgctttgaccaaatttcaggaccctgcagaggcggataaatta
ttgaaaattcagagggagttggatgaaactaaaatcatccttcataaaactattgatagt
gtgcttgcacgaggtgagaggctggacagtttagttgagaagagttcagatctgagtgct
gcgtctcagatgttctacaagcaggctaagaaaaccaatcaatgttgtaccatactgtaa
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