Gossypium hirsutum (upland cotton): 107948710
Help
Entry
107948710 CDS
T04793
Name
(RefSeq) two-component response regulator ARR12-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107948710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107948710
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
107948710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
107948710
NCBI-ProteinID:
XP_016738829
UniProt:
A0A1U8NLN5
LinkDB
All DBs
Position
A08:127223897..127227288
Genome browser
AA seq
661 aa
AA seq
DB search
MEEKMGGSNGEDSGEDQFPVGMRVLAVDDDPICLKILANLLCKCQYQVTTTNQAIIALKM
LRENKNRYDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGITHGACDY
LLKPVRIEELKNIWQHVVRRKKPDSKDELAAPNHDKARGGTGEAGQTWVACSSDQKVNKK
RKDQSEDEEEETEDNGRENEDSSCQKKPRVVWSVDLHRKFVAAVNQLGLGDQAVPKKILD
LMNVEGLTRENVASHLQKYRLYLRRLSSVATQQANMVVALGSRGPSHLRTGSLDGFGDFR
SFTGPGRFSSASLPSYQSRGTFGRLNSSAALTLSGISSGVIQPGNSVNGLRKIQPVVFPA
NQNQNGVLFQGITASIELNQLSQTKSTNHFGKYNCVDERNVFRISSSFPDARVVVGSSSN
SLSTASGNALVLQGNTQQVQCSAAFENLPSFGMTSLNRESNDLSVRGSSNCLEHGRCSEN
WQGTVQLSNFPPSNEQLPSNNLQESIPWRNSSPSNGCIALSSMASSAFLGDSRADVLCKA
GLNNSYSHVDSRVSASGSMMDQSNAVSSNTNDVSLFSHLNGEAPFAVWLSEGDKSSFDTD
LRSNDNFLFLQSKPQNGFSQNNFESLEDIMSPVFKLEQNNETAFMDGGFGFDVAYPLGSC
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaaatgggtggttccaatggtgaagatagtggtgaggaccagtttccagtt
ggcatgcgtgttttagctgttgatgatgatcctatttgcctcaagattttggctaatctg
ctgtgtaaatgccaatatcaggttactacgaccaatcaggcaattatagcccttaaaatg
ttgagggaaaacaaaaacagatatgatttggttattagtgatgttaatatgccagatatg
gatgggtttaagctacttgagcttgtggggcttgaaatggacctgcctgtaatcatgttg
tcggcacacagcgataccaagcttgtaatgaaggggattactcatggtgcttgtgactac
ttattgaagcccgttcgaattgaggagctgaaaaacatatggcaacacgtggtcagaaga
aagaaaccggactctaaggatgaacttgcggccccaaatcacgataaagctcgaggagga
actggagaagctggtcaaacatgggtggcctgcagttcggatcagaaagtcaataagaag
agaaaggaccaaagtgaagatgaggaagaagagactgaagataacggacgtgagaatgaa
gactcctcgtgccagaagaagcctagagttgtttggtctgtagatttgcataggaagttt
gttgcagcagtcaatcaattgggtcttggcgaccaggctgttccaaagaaaatccttgac
ctcatgaatgttgaagggcttacgagggagaatgtagcaagccatctacagaaatatagg
ctttacctgagaagactcagcagtgttgcaacacaacaagcaaacatggttgttgcatta
ggcagtagaggtccctctcacttacgtacaggttcactggatggctttggggattttcgc
tcattcactggacctggaaggttttcaagtgcttctctaccatcgtatcaatcacgtgga
acgtttggtagattgaactcctcagctgctttgaccctaagcggtatttcttctggtgtg
attcaacccggaaattctgttaatggtcttcgaaagattcagcctgtggtatttcctgca
aaccagaatcaaaatggagttttgtttcaagggatcacggcttctatagagctcaaccaa
ctgtcgcagaccaagtccactaatcactttggtaaatacaattgtgttgatgagcggaat
gtttttcgtatttcctctagcttcccagatgctagagtggtggttggtagctcaagcaat
tctctgtcaactgcctcaggcaacgctttggtgttacaaggaaacacgcaacaggtgcaa
tgtagtgctgcatttgaaaatctaccctcttttggtatgacatcactgaatcgggaatct
aatgacctgagtgttcgtggttcttctaattgtcttgaacatggtagatgcagtgagaac
tggcagggcactgttcaattatccaatttcccaccaagtaatgagcagctgccgagtaat
aatctgcaagaaagcatcccttggaggaactcttccccaagtaacggttgtattgctctt
tcttcaatggcaagttcagcatttttgggggattctagggctgacgtgctctgcaaagct
ggcctaaataattcatacagccatgtggactcccgggtttctgcaagtgggtctatgatg
gaccaaagcaatgctgttagtagtaacacaaatgatgtttctttgttcagccatttaaat
ggcgaggctccttttgctgtttggctctctgagggcgacaaatcatcgtttgacacagat
ttgaggtccaatgacaacttcctcttcctgcagtcaaagccacagaacggtttcagtcaa
aataattttgaatccttggaggatataatgagtcccgttttcaaactggagcaaaataat
gagactgcattcatggatgggggattcggatttgatgttgcatacccccttggatcgtgc
atgtga
DBGET
integrated database retrieval system
