Gossypium hirsutum (upland cotton): 107948791
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Entry
107948791 CDS
T04793
Name
(RefSeq) nucleolar and coiled-body phosphoprotein 1
KO
K03504
DNA polymerase delta subunit 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03030
DNA replication
ghi03410
Base excision repair
ghi03420
Nucleotide excision repair
ghi03430
Mismatch repair
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107948791
03410 Base excision repair
107948791
03420 Nucleotide excision repair
107948791
03430 Mismatch repair
107948791
03440 Homologous recombination
107948791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107948791
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107948791
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107948791
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107948791
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107948791
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107948791
MMR (mismatch excision repair)
DNA polymerase delta complex
107948791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
107948791
NCBI-ProteinID:
XP_016738927
UniProt:
A0A1U8NIM8
LinkDB
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Position
A04:10331274..10335423
Genome browser
AA seq
529 aa
AA seq
DB search
MSQIETLGILEEIQALVSDKLQVVSYKWLSRNFLVSSNVAKRLLAEFVEKHGSGLEVVYS
LSGWLKNSPSNYHIQLVTGPKLSEAKQVYDGNCRVHVYSVQACIPKDLAALWNTEFIQAE
ELFKQPTSVDNCLRDNRFCGISNSFVKRNVDGTPAKVATAQPNSVGISGLSMHNSAQSNA
PQQNKVQQSSSKVAQKPPIVIKGIKSDSISGEVHDLVTKPSADKEKNISFPSNKKKGQND
KGSTGNGGSLANFWDRASAKPKTCSAPADNSDSIQNFNDAQVSSCEAVEHENSDIDAQEV
NFGRASNSEGNRKRRVVFDLSDEDEYEDAVNLASPDPPKRKSFLDSKQNSKTSVPERPDV
DKPDKDEVTVKEERTANREPNRSLGEETSLGSKSKNGKNSSSVKLESQLPEIDLKKDKVT
DASSNSPKRRKVLKTRIDDRGREVTEVVWEGEETEVKKVESDVQKKASGATNATTNTVTN
TNSRPAVAKRSPAVGTTAPSNPGGKTGNKKAGNAKDPKQGNILSFFKKV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaattgaaaccctaggtattctcgaggagatccaagctcttgtctctgataaa
cttcaagtagtatcctacaagtggttgagtcgtaattttttagtctcatccaatgttgca
aagagattgcttgcagagtttgttgagaaacatggaagtggcttagaagttgtatatagt
ttgtctggctggttgaagaactctccatcaaattatcatattcagctcgtgacagggcct
aaactttcggaggccaagcaagtatatgatggcaattgcagagttcatgtgtatagtgtg
caagcttgcatcccaaaggacctggctgcactttggaatactgaatttatacaagctgaa
gagctcttcaagcagcccacctcagtggataattgcttgagagataacagattctgtggg
atttcaaattcatttgtcaagcgcaatgtcgatggtactcctgcgaaggttgcaactgca
cagccaaatagtgtgggaatctcaggactgtccatgcataattctgctcaatccaatgct
cctcaacaaaataaggttcagcaatcaagctcaaaagttgctcagaagcctcccattgtg
ataaaaggtatcaaaagcgacagtatcagtggtgaagtccatgatttggtcaccaagcct
tctgctgataaagaaaaaaatatttcctttccttctaataaaaagaaaggccagaatgat
aaaggctccactggaaatggaggttcattagcaaatttctgggatcgtgcatctgcaaaa
ccaaaaacctgttcagcgccagcagataatagtgattccatacaaaattttaatgatgca
caagtttcatcttgtgaagcagtagaacatgagaacagtgacattgatgctcaagaagtt
aattttgggagagcttctaatagtgaagggaataggaaacggagggtagttttcgattta
tcagatgaagatgagtatgaagatgctgtcaatctagcttcacctgatccccctaaaagg
aaatcatttttagattcaaaacaaaattctaaaacttcagttccagagaggcccgatgta
gacaaaccagacaaagatgaagtaacagttaaggaagagagaactgctaatagagaaccc
aatagatcactgggggaagaaacttcacttggcagcaaaagcaaaaatggtaagaattcc
tcttcggtcaagcttgaaagccagcttcctgaaattgatttaaagaaggataaagtgact
gatgcctcatcaaattcacctaaaaggaggaaagtgttgaagacacgtattgatgaccgt
ggaagagaagttactgaggtagtttgggaaggcgaggagacagaggtgaagaaggttgaa
agtgacgtgcagaagaaagctagtggagcaaccaatgctaccaccaatactgtcacaaat
actaatagccggcctgctgtagccaaaaggtcccctgcagttggaaccactgcaccatct
aatccgggaggtaaaacgggaaacaagaaagctggaaatgcaaaggatcctaagcaagga
aacattctatctttcttcaaaaaggtctga
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