Gossypium hirsutum (upland cotton): 107948863
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Entry
107948863 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107948863
04131 Membrane trafficking [BR:
ghi04131
]
107948863
04121 Ubiquitin system [BR:
ghi04121
]
107948863
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107948863
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
107948863
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107948863
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107948863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
DUF629
IBR
Motif
Other DBs
NCBI-GeneID:
107948863
NCBI-ProteinID:
XP_016739001
UniProt:
A0A1U8NIY2
LinkDB
All DBs
Position
A04:75499461..75501829
Genome browser
AA seq
364 aa
AA seq
DB search
MLQIRLSKTPSSDAAGPVKPLPVETVTVACPDHLVIADLPVAKSIGAAISFSLVKTVGRK
SRRQLGERVHFCVGCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKIME
GIFICAAPHCLKSFLKKTEFESHIHESHAALIQPNAEKEDGKGSEVHSAKQPTGSDAAVR
GLPRPVISPGSNPLLHDTEDKGRWQQPREQLPSRPIMQPKGPLVFGQVPNYPLEPQLDDN
HFQQGFDLQGTPQPDSSQFSDKLQGLLSENQYSEYPPIHSMQPPNFAMPMNSNRMLTPYG
VPPFPTDGSQPFYGAPYEMARQSSASDVGSEQGSLLSFPPGPVGGVNYPTAYPPWNGGQP
GVHF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatccgactaagcaagaccccgtcctcggacgccgccggtcccgtgaagcca
ttgcctgtggaaacggtgacggtggcttgccccgatcaccttgttatcgctgaccttccc
gttgccaagagcattggcgccgctatctcgttctcgctcgtcaagaccgtcggtcgtaag
tcacgccgccagcttggcgagcgagttcacttctgcgttggctgcgattttcctatagcc
atctacggccgcttgagtccttgtgagcatgccttctgcctcgattgtgcaaggagtgat
tcgatttgctatctttgtgatgaacgtatacagaagattcagacaatcaagataatggag
gggatcttcatctgtgcagctcctcactgtcttaaatctttcttgaagaagactgaattt
gaatctcatatccatgagagccatgctgcccttatacagcctaatgcagagaaggaagat
ggtaaaggctcggaggttcatagtgctaaacaacctacaggttctgatgctgctgttcga
ggtcttccaaggcctgtcatttctcctggttcaaaccccctgctccatgatactgaagac
aaaggtcgttggcagcagcccagagaacaactgccttcaaggcctataatgcagccaaag
ggaccactagtatttggtcaagttccgaattatccattggagccccaattagatgataac
cacttccaacaaggctttgacctgcagggcaccccgcaaccagattctagtcagttttca
gacaagctgcagggacttttatctgagaatcagtattctgaatacccacctatacattcc
atgcaaccacctaattttgctatgccaatgaattcaaaccgaatgttaactccatatggt
gttcctccttttccaactgatggatctcaaccattttatggtgctccttatgaaatggct
aggcaaagttcagcgtcagatgtcggttccgagcaggggtcattgttgagtttcccacca
ggtccagttgggggtgtgaattacccaacagcttatccgccttggaatggagggcaacct
ggtgtccacttttaa
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integrated database retrieval system
