Gossypium hirsutum (upland cotton): 107948908
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Entry
107948908 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107948908
04121 Ubiquitin system [BR:
ghi04121
]
107948908
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107948908
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107948908
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107948908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
Anti-TRAP
Rad50_zn_hook
DUF7129
zf-HC5HC2H
zf-RING_10
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-GeneID:
107948908
NCBI-ProteinID:
XP_016739057
UniProt:
A0A1U8NIZ9
LinkDB
All DBs
Position
A04:complement(73449460..73451289)
Genome browser
AA seq
369 aa
AA seq
DB search
MESIRSPYWCYRCNRFIRIRVRSPHDSLNCPDCGGGFIEEIETPSRSPIHHRFPAAAMYS
DTPSPALSPSPTATPHFRRTRRNAGDRSPFNPVVVLRGPTSESEGIVTERGNRNFELYYD
DGSGSGLRPLPASMSEFLMGSGFDRLLDQLSQLEANGVGRFEQPPASKAAIESMPVIKIL
GSHVRSESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTENNG
NNFAENEAVRDEEAVGLTIWRLPGGGFAVGRFTGGTRAAEREFPLVFTEMDGGFNNAGAA
PRRISWAPSGRRSQESRGLGRVFRSFVSFFGRFRSSSRSGSDSGFTRRSRSSSVFGRSSR
RDSDWDFED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgattagatcgccctattggtgctacagatgcaatcgattcatccggatccgg
gtccgatctccccatgattcgctcaactgccccgactgtggcggaggattcatcgaagaa
attgaaacaccctctcgatctcccatccaccaccgtttccctgccgctgccatgtattcc
gacacgccaagccctgcgctcagcccaagccccaccgccactcctcatttccgccgaact
cgtcggaacgctggcgatcgctcccctttcaatcccgttgttgtcctccgtggacccacc
tccgaatccgaaggcatagttaccgaaagagggaacagaaatttcgagctttattacgat
gatggctctggctcgggtcttcgtcccttacctgctagcatgtcggagtttttaatgggg
tcgggttttgatcggcttcttgatcagttatctcaattagaagcaaacggagttggccgt
tttgagcaacctcctgcttcgaaagcggcaattgaatcaatgcctgtgattaagatccta
gggagccacgtaaggtcggaatctcactgtgcagtttgtaaggagcctttcgagctcgac
tccgaagcacgggaaatgccttgtaagcatatttaccattcggattgcattttaccttgg
ctttctattcgaaactcttgtcctgtttgtcgccatgaattgccaacagaaaataatgga
aataactttgcggaaaacgaggctgttagagatgaagaagctgtgggattaaccatatgg
aggttaccgggaggtggctttgcagtggggaggtttactggagggacgagagcagcggag
agggagtttccactagtgttcacggagatggatggtgggtttaataatgcgggtgctgct
cctagaagaatttcgtgggcgcctagtgggagaaggtcacaagagagtagaggtttaggg
cgtgtttttcggagttttgtttctttctttgggaggtttaggagttcgtcacgttcaggt
tcagattctggatttacaaggagaagtagatcgagttcagtgttcggtagatcatcgaga
agggatagcgactgggatttcgaggattga
DBGET
integrated database retrieval system
