Gossypium hirsutum (upland cotton): 107949013
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Entry
107949013 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107949013 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107949013
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107949013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107949013
NCBI-ProteinID:
XP_016739196
UniProt:
A0A1U8NJA7
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Position
D04:54716577..54724141
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AA seq
1038 aa
AA seq
DB search
MKPMETIQDLIDEAKVRTVWWVIAIFAVTYFLSHTSTSMWMNLPVAVLILSALRILTNEV
EFRWKIKSVRPQTYLSHLEKKQLSVNDYRLSSTPPPPKWKRKIDSPMVESAINEFIGKIL
KDFVTDLWYSEITPDRETPELMRAVILDAIGEISGRVKRINLVDLLTRDIVDLIGNHLDL
FRRNQAAIGVDVMVTLSSEERDERLKHHLLVSEELHPALISPESEYKVIQKLVGGILAIV
LRPREAQCPLVRTIAREIVTCLVLQPLLKLASPGYINEVIEHVLLAIKDDTNKMVVGSDQ
PSVGVHGDDSTSYKKSSSNSQGADLTLARIEDRKETYSDCNRYEEESVQPRPADWARILE
AATQRRTEVLAPENLENMWTKGRNYKKKNKHEKAGFQESITKDSVTKSAVLTGNSGSEIS
TSKFGTSTGREEKNVMQLMPGLSNDTQLCDDNTTGTKLGSEFNKSSSFEGDHLVGKHTDA
SKQAADGNKNRLRRSSSTSDLKVKPDIKKALTGDIGRPISKFYSHDVGRHSEEYSGKIAS
NMVLHNEEPHTPKLRCRVIGAYFEKLKSKPFAVYSIAVTDAENRTWFVKRRYSNFERLHR
HLKEIPNYTLHLPPKTIFSSSTEDALVHQRCIQLDKYLQDLLSKANVAEQHEVWDFLNVS
SKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFRGVSDGLMRKVVGSSSLPIEASSSADRTL
SWNADEMAKDISRQSNLETVNSASDNDERYKDGSHGQDDRSGPQGHGSHSEDELNSKSLP
PKVIEQGGEPDNFVPEKQDLGVKPELLGQGGFPEVKFSSSSSPWEDPVGMPPEWTPPNVS
VPLLNLVDKVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRREDTVALGI
RWVQDVLWPGGTFFTKLVNIQSKFGDTQQPNQQLSGTSSQFTGSNVSKPGSFEQQLEATR
RASDIKKMLFDGAPTTLVSLIGHKQYRRCARELYYFTQSTICVKQLAFAILELLLISIFP
EMRELVKDLHGKKQVKVA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatggagacgatacaggatctgatcgacgaagccaaagtacggacagtttgg
tgggtcatagcaatctttgccgtcacttacttcttgtctcatacaagtacatcaatgtgg
atgaatttacctgtagcagttcttatactgtcggcattgcgaattttaactaatgaggtt
gagttcagatggaaaattaaatcagttcgtccgcaaacttatttatctcatttggagaag
aaacagttgtccgtgaatgattaccggctttctagcacaccacctccgcccaagtggaag
aggaaaattgattctcctatggtggagtcagctatcaatgagtttattggtaaaatactc
aaggattttgttactgatttatggtattcggagatcactccagatagggagacccctgag
ttgatgcgtgcggtgattttggatgctattggtgaaatatcaggaagggtgaaaaggata
aaccttgttgatttgctaacaagggatatagttgatttgatagggaaccacttggatctc
tttagaagaaatcaagctgcaataggtgttgatgttatggtaacattgtcatctgaggag
agggatgaaagactgaaacaccatcttctggtttctgaagagcttcatcctgcattgatt
tcaccagagagtgagtacaaggttattcagaagcttgttggtggaattttagcaatagta
ttgagaccacgagaagctcaatgtcctctggttcgaactattgcccgtgagattgtaact
tgcttggtattgcaacctcttttgaaattggcaagccctgggtatatcaatgaagtgatt
gaacatgttctacttgccattaaagatgatacaaataagatggtggttggttctgatcag
ccttcagtaggagtacatggtgatgattctacctcatataaaaaatcgtcctcaaatagt
caaggagctgatttgactttggctagaattgaagataggaaagaaacatattcagattgt
aacagatatgaggaagaatcagtacagcctcgaccagctgattgggctcgaatattagag
gcagcaactcaaagaagaactgaagttcttgcccctgaaaatcttgaaaacatgtggact
aaaggaagaaactacaaaaagaagaacaaacatgaaaaagcaggatttcaagaatctatt
acaaaggattctgtgacaaagagtgcagtattaacagggaattcaggcagtgaaatctct
accagcaagtttggaacttcaactggaagggaagagaaaaatgtgatgcagctgatgcct
ggtttaagtaatgacactcagttatgtgatgataacactaccggcacgaagttgggatcg
gagtttaacaagtcatcatcatttgaaggagatcatcttgtcggaaaacatactgatgct
agcaagcaagctgctgatggaaataagaataggcttaggagatccagcagtacctctgac
ttgaaagttaaacctgatataaagaaggcacttacaggagatattggaaggccaatttct
aagttctacagccatgatgttggcaggcatagtgaagaatatagtggcaagattgcctct
aatatggtgcttcacaatgaggaaccacacactccaaagcttagatgtcgggttattgga
gcgtactttgagaaacttaaatcaaaaccattcgcagtttattcaattgctgtgacagat
gcggaaaacagaacttggtttgtcaagagaagatacagtaactttgaacggttgcataga
catcttaaagaaattcctaattatacattgcatttacctcccaaaacgatattttcatca
agcactgaggacgctttagttcatcagcgctgcattcagcttgacaaatatctacaagat
ctgttgtctaaagccaatgtggctgaacagcatgaagtgtgggattttttaaatgtttcc
tcaaagaattactcgtttggaaaatcttcttcggtgatgagaacccttgcagtcaatgtg
gatgatgctgtggacgacatcgtacgccagtttagaggagtatcagatggcttaatgcgc
aaagttgtcggttcatcttctcttcctattgaagcctcttcttcagctgacaggaccttg
tcatggaatgcagatgagatggctaaggacatttctaggcaaagtaacttagaaacagtg
aatagtgcttctgacaatgatgaacggtacaaggatggtagccatggtcaggatgataga
tctggtccacaaggtcatggctcgcattcagaggatgaattgaactcaaagagtttgcca
ccaaaggtgatagaacaaggtggagaacctgacaattttgttcctgagaaacaggattta
ggtgtgaaacctgaattacttggccagggtggatttcctgaagtaaaattttcatcatca
tccagcccttgggaggatccagttggaatgccccccgagtggacaccacctaatgtgagt
gtacctttgctgaatctagttgataaggtgtttcagctgaagagaagaggctggctaaga
agacaggtcttttggatatctaagcaaatattacagctggtgatggaggatgccattgat
gactggcttttgaggcagatttattggcttcggagggaagacactgttgccctaggcatt
cgatgggttcaagatgttctatggccaggtggtacattctttacaaaattggtgaacatt
cagagcaaatttggtgatacccaacagccgaaccagcaactttcagggacctccagccag
tttactgggagtaatgtctctaaacctgggtcctttgagcaacaacttgaggctactcgt
agagctagcgacatcaaaaaaatgctttttgatggagctccgacgaccttagttagcttg
atcgggcataaacaatatcgacggtgtgcaagagagctttattatttcactcagtccact
atatgtgtcaagcaacttgcttttgcgatattagaacttctactcatatctattttcccc
gagatgcgggaacttgtgaaggatcttcatggcaagaaacaagttaaagtcgcgtag
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