Gossypium hirsutum (upland cotton): 107949058
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Entry
107949058 CDS
T04793
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107949058
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107949058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107949058
NCBI-ProteinID:
XP_040955293
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All DBs
Position
D08:complement(978576..983503)
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AA seq
478 aa
AA seq
DB search
METTNFKRIKHGFFPEIINREMRISSPQTFSRHFSSSQVIVEKIDLYGKLNGHEGCVNTV
EFNFNGDILVSGSDDKHVMLWNWATKTKTLCYASGHLDNIFQARIMPLTDDKRIITSSAD
GQVRLGEILENGQVKTRRLGKHQGRVHSLAVEPGSPHIFFSCGEDGLVQHYDLRCGSASK
LFHCFSFKETNSPPLNIRLNAIIIDPRNLNYFAIGGSDEYARVYDIRRYRSDGSNVSDEP
VNLFCPRHLLHSNHVHITGLAYSKASELLISYNDELIYLFQKNMGLGPSPLSLESETQLS
NEEPQVYAGHRNSRTVKGVSFFGPKDEYVMSGSDCGHIFIWRKKDAKLVRVMVGDRRIVN
HLEPHLCMPFLATCGFDKDVKLWAPMAGDAPALPKNLKKITESNRQNREDQSPATLAPDV
IMHVVRLQRRQMFGYVERRYSRSDLESDEEDGDEDYISGLANDITFSEEYPGENFGDC
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacaaatttcaagagaatcaaacatggttttttcccagaaatcatcaaccgt
gaaatgagaatttcttccccacaaactttttctcgccatttctcttcttcacaggttata
gtagaaaaaatcgatctttatgggaaactaaatggccatgaaggatgtgtaaacactgtg
gaattcaactttaatggtgatatcttggtttcaggttctgatgataagcatgttatgtta
tggaattgggcaactaaaaccaaaacactttgttatgcttctggtcacttagacaatata
tttcaagctagaattatgcctttaactgatgataagagaataatcacttcttctgctgat
ggtcaggtgaggcttggagagattttggagaatggtcaagttaagacaagaaggttggga
aagcaccaaggtcgtgtacacagccttgctgtcgagccaggaagtccacacatattcttt
agttgtggtgaagacggcttagttcaacattatgatctgcgatgtggttcggcttcgaag
cttttccattgcttctcattcaaagaaactaatagtccgcctttaaacataaggttaaat
gccattataattgatccaaggaatctgaattactttgctattggaggttccgatgaatat
gcacgcgtctatgatatcagaagatatcggtcggatggatctaatgtttcggatgaaccc
gtgaacttattttgccctcgccatctgcttcactctaaccatgttcatattacaggatta
gcttattctaaagcaagtgaacttcttatttcttacaacgatgagctgatttatttattc
caaaagaacatggggctcggaccttctccgctatctcttgagtctgaaactcagctgagc
aatgaggagccgcaagtttatgcgggtcatagaaactcacgaaccgtcaaaggagtgagt
ttttttggccccaaagatgaatatgtgatgagtggttctgattgtgggcatatatttatt
tggaggaagaaggatgctaagcttgttcgagtaatggtaggtgatcggcgtatagtaaat
catcttgagcctcatctgtgcatgccatttttagctacatgtggatttgataaagatgta
aagctttgggctcctatggctggtgatgctcctgcacttcctaaaaacttgaagaagatt
acggaatctaatagacagaatagagaagaccagtccccggcaacacttgcccccgatgtt
ataatgcatgttgtccgcctacagaggcggcagatgtttggatatgttgaaagaaggtat
agtagatctgatctcgaaagtgatgaagaagatggggatgaagattatatttcagggctc
gcaaatgacatcacattttcggaagagtatcctggtgagaacttcggagattgctag
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