Gossypium hirsutum (upland cotton): 107949104
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Entry
107949104 CDS
T04793
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107949104
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107949104
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107949104
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
107949104
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
107949104
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107949104
Prokaryotic type
107949104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
107949104
NCBI-ProteinID:
XP_016739310
UniProt:
A0A1U8NKD5
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Position
A04:complement(86415704..86419994)
Genome browser
AA seq
488 aa
AA seq
DB search
MAEEAILGYLATSEEIPDSGQFASQHGFQHNDVVNVIKSLHGFRYIDAQDIKRESWVLTD
EGKMYAADGSPEVQLFLAVPQEGSISKDELQKKLEPSVFKIGCSQAGKNKWVDMGKQVSR
KVQHVEDKVKDLLIRIQKGEALGKDDINSLKARKLIVAQTWKGYSVKKGPNYAPTRKKVA
TDLTRENLQRGDWKELEFKEYNFNAKGPPAEAGHLHPLLKVKQQLKNIFLQLGFEEMPTN
NFVESSFWNFDALFQPQQHPARDSHDTFFLEVPSTTRELPEDYVKLVKRVHESGGYGSRG
YMYDWKREEANKNLLRTHTTAVSTRMLYALAKQPFTPKRYFSIDRVFRNESVDRTHLAEF
HQIEGLVCDKGLTLGDLIGVLNDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLKKWV
EIGNSGMFRPEMLLPMGFPEDVRVIAWGLSLERPTMILYGVDNIRDLFGHKVDLSLMKRN
PICRLGID
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagcaatactaggttacctagcgacgtctgaagaaatcccagattcaggc
caattcgcatcccaacatggtttccaacacaacgatgtcgtcaatgtcatcaagagcctc
catggtttccgctacatcgatgctcaagacattaaaagggagagttgggtcctcactgat
gaaggcaagatgtatgccgccgatggctcccctgaagttcaactcttcttagccgtccct
caagaaggttctatttctaaagacgaattacagaaaaagttagagccttcggttttcaaa
attggttgctcacaagctgggaaaaacaaatgggtcgatatgggaaaacaagtttcgaga
aaagttcaacatgtggaagataaggtcaaggatttgcttattagaatacaaaagggagag
gcactcggcaaagatgacattaattcacttaaagctaggaagcttattgttgcacagaca
tggaaaggttattcagtgaaaaaagggccaaactatgcccctacaagaaagaaagttgct
actgatctgactcgagagaatctacagaggggtgactggaaggaactagagttcaaagag
tataacttcaatgctaaaggaccacctgctgaagctggccatcttcatccattactcaag
gtgaaacaacaattaaagaacatatttcttcagctgggttttgaggagatgccaacaaat
aattttgtcgaaagcagcttctggaactttgatgcattgttccagccacaacaacaccct
gcacgtgattcacatgatacattctttctggaagttccatctactacaagggaactgcct
gaagattatgtgaagttggtgaagcgtgttcatgaatctggtggttatggctccagggga
tacatgtatgactggaaaagagaagaagcaaacaaaaacctattgcgtactcacacaact
gctgtctctactcgaatgctttatgctcttgcaaagcaaccttttacccccaaaagatat
ttctctatagatcgtgtgttcagaaatgaatctgtggaccgaactcatcttgcagagttc
catcagattgaaggcttggtatgtgacaaggggcttactcttggtgatttgattggtgtc
ctgaatgacttcttctcacgactaggaatgtccaagttgcgcttcaagcctgcttacaac
ccatatactgaacctagcatggagatattcagttaccatgaaggcttgaagaaatgggtg
gaaatcggaaattcgggcatgttcagacctgaaatgttgcttccaatgggattccctgag
gatgttcgtgttattgcttggggcctgtctctcgaaagaccaactatgatactctacgga
gtcgataacatccgggatctattcggacataaggtggatcttagcctcatgaaacgaaac
cccatctgtcgtctcggaattgattag
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