Gossypium hirsutum (upland cotton): 107949131
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Entry
107949131 CDS
T04793
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107949131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107949131
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
SR proteins
107949131
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107949131
NCBI-ProteinID:
XP_040946840
UniProt:
A0ABM2ZW72
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All DBs
Position
D04:complement(53745074..53749464)
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AA seq
279 aa
AA seq
DB search
MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRIIEPVPRSRSRSPRR
RHRDDYSRDRGYRRRSRSRSYDRYERDRYRGKDRDYRRRSRSRSASPDYSKGRGRGCYDD
DRRSSSRSLSASPARRSPSPRRSLTPRKASSPRGESPYRRSRDGGSPSPRSVSPRGHPAD
SRSPSPRNSDVDQCSGERVTWANGHDVDVVAVDAVCICR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttggaagatcaggtcctcccgacatcactgatacctactctcttctcgtc
ctcaatatcacattccgtacgaccgctgatgatttgtttccattgttcgataagtacggg
aaagtcgttgacatctttatccctaaagatcgaaggactggtgattctcgaggttttgca
tttgtacgatataagtatgcggatgaggcacagaaagctgtggataggctcgatgggaga
gtcgttgatggtcgggagataacagttcaatttgcgaaatatgggcctaatgcagaaagg
attcacaaaggaaggattattgaaccagttccaaggtcaagaagtcgcagcccacgcaga
aggcaccgggatgattattccagagataggggttataggagaagaagtcgtagtaggagc
tatgaccggtatgaacgtgatcgatatcgtgggaaagacagagactatcggcgtcgcagc
aggagtcgtagtgcaagtcctgactattctaaaggtcgaggaagagggtgctatgatgat
gatcggcggagtagcagtcgatcactgagtgcttctcctgctcgccgcagccctagtcct
cgtaggagtcttaccccacgcaaggcctcttctccaaggggtgaaagtccttacaggcgc
agccgtgatggagggtctccaagtcctcgaagtgtttcaccacgaggccaccctgctgat
tctcgtagtccatctcctcggaactcagatgttgatcaatgttcgggggaaagagtgact
tgggcaaatggacatgatgttgatgttgtggctgttgatgctgtttgtatctgtagatga
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