Gossypium hirsutum (upland cotton): 107949175
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Entry
107949175 CDS
T04793
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107949175
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107949175
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
107949175
NCBI-ProteinID:
XP_016739389
UniProt:
A0A1U8NN74
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All DBs
Position
A05:complement(102038345..102043787)
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AA seq
466 aa
AA seq
DB search
MSTSSQPQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
PNDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PDHVTSCYLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLLQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHKVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDPSLLATQVPGLPAAPNAWQ
NPQGVPVHHGTDYSASAAIQGQPPAGQVPAWDPNFQARPPYGSVPGQTYQSLTAPTYVNA
ARPAGSSPLSQPGASSMPMQQQQQPPWANVRQGGAAVLGRPPYYSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaagccaaccccagttccgttatacccagacgccatcgaaggtcctccat
ctccgtaacctcccatgggagtgtgcggaagaggaactcgtcgaactttgtaaacccttt
gggaagatcgttaatactaaatgcaatgttggcgccaaccgaaaccaagcttttgttgaa
ttcgcagacttaaatcaggctatttcaatggtttcatactatgcttcatcatcagaacca
gcacagattcgtggaaaaactgtgtatattcaatattcaaacagacatgaaattgtcaac
aataaaagtcctggagatacccctggaaatgtgttgctggttaccattgagggtgtggaa
cctaatgacgtgaccattgagaccattcacttggtattttctgcatttggttttgtgcac
aagattgctacttttgaaaaggctgccggattccaggcattaatccaattcactgatgct
gaaactgcatcttcggcgaggaatgcattggatgggagaagtattcccaggtacttgctt
ccagatcatgttacttcttgttacctgagaatctcatattcagcacacactgatctgaat
atcaagtttcagtctcatcggagcagggactataccaatccttaccttcctgtgaatcct
actgcaatggaaggacttttgcagcctgtagttggtcctgatggaaaaaagcaagagcct
cagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgatgtt
cttcacaaggtgttctcagcatttggcacagtccaaaagattgccatatttgagaagaat
ggtggaacacaggcacttattcaatatcccgatgttacaaccgcagcagttgccaaagaa
tccttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcatacagtgataaaagtagagattacacaatctca
gacccgagtttgcttgcaacacaagttccgggattgcctgctgctccaaatgcttggcag
aatcctcagggtgttccggtgcaccatggtactgactattcggcttcagctgcaatacag
ggtcaacctcctgctggacaagttcctgcttgggatccaaattttcaggctaggccgcca
tatggatcagttcctggtcaaacatatcaatcgttgacagcccctacatacgttaatgcg
gcaagacctgcaggttcatcacccctttcacaacctggtgcatcttccatgcccatgcag
cagcagcagcagccgccatgggctaatgttagacaaggaggcgcagcggtgctgggtcgg
cctccttattacagtcgatga
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