Gossypium hirsutum (upland cotton): 107949219
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Entry
107949219 CDS
T04793
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107949219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107949219
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107949219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
107949219
NCBI-ProteinID:
XP_016739444
UniProt:
A0A1U8NNC4
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All DBs
Position
A04:83793829..83798285
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AA seq
529 aa
AA seq
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MFKTNNVTSRIFERQIRTPAPGTSVHSARRFYENLVPSFTIYDVECPDHSFFKFTDDGQY
FVCFSRNRQDLIVYRPTWLSFSCKGEDCDNNQELPPQVKRFESFFTQLYVKPLASCNELI
CKDFFLYMESNQFGIFATSTAQIQDARGTDGAILGVPSFEKITIHLFRLEDGFKLDEKVF
HNDCVNLTHNMGAFLYDDLLAVVSLRYQTIHILQIRDSGNLVDVRAIGAYCREDDELFIN
SSSQLAGNRGDLVDNGTNHDQPNSNNSFLSGIKQRLLSFIFREIWSEETDQTQRVQCLKK
KFYFHFQDYVDLVILKVQFLDRHHLLIKFGSVDVGASRNTDQLPAFFAVYNMETTEIVAF
YQNAADELYLLFERFCDHFHATSINSMYMNFISSHSNNIHALEQLKSMKNKATSISQFVK
KMLSSLPLNCQSMSPSPYFDQSLFRFDEKLISATDRPRQSTDHPIRFNSRRQGDILKFKI
KTGPEFGSADGRSKKYSHFLFHPVWPLALSFIQPSLFLPPSAVNIHFRR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaccaacaatgtcacttcccgaattttcgagcgtcaaattcgaacccctgcg
cctggaaccagtgttcactctgctaggagattttacgagaatttagttcctagttttacg
atatatgatgtggaatgtccggaccattcgttttttaaattcacggatgatggtcagtac
tttgtgtgtttcagtaggaaccgtcaggatttgattgtgtataggccgacatggctttcg
ttttcgtgtaaaggagaagattgtgataataaccaggaactccctccccaagttaagagg
tttgagagtttcttcacacagttatatgttaaaccacttgcttcctgcaacgagcttata
tgtaaagacttctttctctacatggagagtaatcaattcggaatcttcgctacttcgacc
gcacaaattcaagatgctcgtggcacggatggtgcaatccttggggtcccatcatttgaa
aaaatcactattcacctcttcaggttggaagatgggtttaagctagatgagaaggtattt
cacaatgattgtgtcaatcttacccataatatgggtgccttcttgtatgatgatttgctg
gcagttgtgtcgcttcgttatcaaacaatacacattcttcaaatcagggactccgggaac
cttgttgatgtgcgagctatcggcgcatactgtcgtgaagatgacgagctttttataaat
tccagttctcagttggcgggtaatcgcggagatcttgtagataatggtacaaatcatgac
cagcctaattcaaacaattcttttttgagtggtatcaaacaacgcttactttcattcatc
ttccgagaaatatggagtgaagaaacagatcaaacccagagggtccaatgcttaaagaag
aagttttatttccatttccaggactatgttgatttggtgatcttgaaggtacaattcttg
gaccggcatcatctgcttatcaagtttggtagtgttgatgtaggggcatcacgcaacact
gaccaacttccagctttctttgctgtatataatatggagacaactgaaattgttgcattc
tatcagaatgcagcagatgaactttaccttctctttgagcggttctgtgaccacttccac
gcaacatcaataaattcaatgtatatgaatttcatatcttctcactcaaataatattcat
gctcttgaacaactaaagagcatgaagaataaagccaccagtatctcacagtttgtaaag
aagatgctgtcctcgttgcctttaaattgtcaatcaatgagtccttctccctactttgat
cagtctctcttccgatttgatgaaaagctaatctctgcaactgaccggcccagacaatcg
acagatcatcccatcaggttcaattctaggaggcaaggagacattctcaaatttaagatc
aagacaggccctgaatttggcagcgcggatggccggagcaaaaagtattcgcatttcctc
ttccatcctgtttggccattggctctctccttcatccagccatctttgttcttgccaccg
tcagcggtgaatattcacttccggcgataa
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