Gossypium hirsutum (upland cotton): 107949460
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Entry
107949460 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107949460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107949460
03036 Chromosome and associated proteins [BR:
ghi03036
]
107949460
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107949460
Coactivators
SAGA/TFTC/STAGA complex
107949460
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107949460
STAGA complex
107949460
TFTC complex
107949460
SAGA complex
107949460
SLIK complex
107949460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
107949460
NCBI-ProteinID:
XP_016739602
UniProt:
A0A1U8NKH2
LinkDB
All DBs
Position
D01:complement(32801249..32806302)
Genome browser
AA seq
522 aa
AA seq
DB search
MDQQQPPPPTPNAPPPSSAVDPPPQPQPQPQIQQQTTPTPPSSTSSTAIPNPNPNPIPKP
LPSAIPPPKQPPQPKPALPSHQPRSAAAFSRPWQQHSAQFTHFSSSSPSASSSPSPSLSS
QPRGSIALGVPSSHSGPSPPSPSPPQSTPFTGSFGHSFGGTSSSNVSQARPMMRGIGMGS
SVGSSSQMRPGGISAQHQQRPLQSSLRPTSSPTSQSPSTQNFQGHGLMRVSAVGSSSSTP
STLQTPQSPNQPWLSSGAQGKPPLPPPWHRPQLRAHIPQQHHSLQTVSQQQHVSSPQVPP
QNISSIQQQEHFEQQFSQSRASQSLPHQQQDSRSQGSANQKPSSLAMVQPSTVQVTQNKA
AITESDDSGGRILSKRSIHDIVNQIDPSEKLDPEVEDILVDIAEDFVDSITTFGCSLAKH
RKSDTLEAKDILLHLERNWNLTLPGFSGDEIKTYKKPITNEVHKERLAVIKKSILAREAA
NAKHIIGQTAVNTKGNVGKAAANIWVLQMLKYEKYHEALFFF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacagcaaccaccgccgccaacccctaatgctcctcctccttcctccgccgtc
gacccacctccgcaaccacagccgcagccacaaattcaacaacaaacaacgccaacgccc
ccgtcctcaacatcctctaccgcaatccctaaccctaaccccaaccctatcccgaaaccc
ttaccttccgccataccaccaccgaaacagccgccgcagcctaaaccagctctcccctct
catcagccaagatccgccgctgcattctcgaggccatggcaacagcactctgcccagttc
actcatttctcttcctcttctccttccgcctcatcgtctccttccccttcactttcctct
cagccgcgaggcagcattgccctcggtgttccttcgtcccattctggcccctcgcctcct
tctccttcacctccgcaatccactccgtttaccggttcctttggccattccttcggtgga
acctctagttccaatgtttcccaggcaaggccaatgatgcgaggaatagggatgggatca
tcagttggttcaagttcacaaatgagaccaggtgggatttctgctcagcatcaacaaagg
cctttgcaatcatctcttagaccaacatcttcaccaactagccagtccccttctacccaa
aatttccaagggcatggccttatgagagtgtcagcggttggttcctcttcttcaacacca
agtactctacaaactccacaatcccctaatcagccgtggctatcatctggagcgcaaggg
aagccacctttgccacccccttggcatagaccacagctgagggcacatataccccagcaa
catcattcgttgcaaacagtttcacaacagcagcatgtatcatctccacaggtgccaccg
caaaatatatcatcgattcagcagcaggaacattttgagcaacagttttcgcaatcaagg
gcctcacaatctctacctcatcaacaacaagattccagatcccagggctctgcaaatcaa
aagccttcttctctcgcaatggtacaaccaagcacagtccaggtgacccaaaacaaagca
gcaattacagaaagtgatgattctggtggtcggattcttagcaaaagaagcatccatgat
atagttaaccagattgatccatctgagaaattggatcctgaagttgaagatattcttgtg
gatattgctgaagactttgtggattctatcacaacatttggttgctcactggccaagcat
agaaagtcagatacattggaagcaaaagacattctcctacatcttgagagaaattggaat
ttgactcttccaggatttagtggtgatgagattaagacttacaaaaaaccgattacaaat
gaggttcacaaagagcggcttgcagtgataaagaaatcaatcttagcgagagaggcagcc
aatgctaagcacatcattggacaaactgctgtaaacacaaagggtaacgttggaaaagcg
gctgctaatatctgggttctccaaatgttaaaatacgagaagtatcatgaggctctattt
tttttttga
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