KEGG   Gossypium hirsutum (upland cotton): 107949523
Entry
107949523         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107949523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107949523
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107949523
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 F-box-like LRR_At5g56370 F-box LRR_Zer-1 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 107949523
NCBI-ProteinID: XP_016739679
UniProt: A0A1U8NP10
LinkDB
Position
D03:18124514..18128152
AA seq 372 aa
MIGEEKVRSEFLNLCFEKLMMVAAGNSGEGVKRKGAVITEWKDIPMELLLRIVSLVDDRT
AIVASGVCSGWRDAICLGLTHLCLSWCWKNMNNLVLSLAPKFTKLLTLVLRQENPQLEDT
AVETIAKFCHDLQDLDLSKSFKLGDRSFYALAHGCPNLTKLNISGCTSFSDEGLEYLTKF
CRKLKILNLCGCVKAATDCALQAIGQNCNMLHSLNLGWCDNVGDLGVTSLAYGCPDLRCL
DLCGCVRITDDSVIALANGCLHLRSLGLYYCRNITDTAMYSLAHSRVKNKASIWQSMKGR
YDEEGLRSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQS
HRTLNSILHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgataggtgaagaaaaggtgcgaagtgaattcttgaacttgtgctttgagaagctgatg
atggttgctgctggaaatagtggtgaaggagttaagaggaagggtgcggtgatcactgag
tggaaagatattcctatggagctgttgttgagaattgtttcccttgttgatgatcgaact
gctattgttgcttctggtgtttgtagtgggtggagggatgctatttgcttgggccttacc
catctctgtctctcatggtgctggaagaacatgaacaacttggttctatcccttgctcct
aaatttaccaaattgctaactctcgtactacgccaagaaaatccgcagcttgaggacact
gctgttgagactattgcgaaattctgtcatgatctgcaggatctggacctcagcaaaagt
ttcaagcttggtgatcgctcattttatgctttggcccatggttgccctaatcttacaaaa
cttaacatcagtggctgcacatcattcagtgatgaaggtcttgaatatttgactaaattt
tgtcgaaaactaaaaatattaaatctctgtggatgcgttaaagctgcaactgactgcgca
ttgcaggctattggacagaactgcaatatgttgcactctttaaatctgggatggtgtgac
aacgttggtgatctaggagttacgagtctagcatatggatgccctgatctcagatgcctt
gacttgtgtggctgtgtccgcataacagatgatagcgtgattgctttggcaaatggatgt
ctccatttgaggtcgcttggtctgtactattgccggaatatcacagacacggcaatgtac
tcactggctcacagccgagtgaagaacaaggcttcaatctggcagtccatgaagggtaga
tatgatgaggaaggtcttagaagtctgaatataagccagtgtactgcactaactccttca
gctgttcaggcattatgtgatacgttccctgctcttcacacctgctctggaaggcattcc
ctcgtcatgagcggctgcttgaacttaacgtccgtgcattgcgcttgtgcagtccaatca
caccgcacactaaacagtattctccatacagctcattga

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