Gossypium hirsutum (upland cotton): 107949552
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Entry
107949552 CDS
T04793
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107949552
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
107949552
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
MiaE
Motif
Other DBs
NCBI-GeneID:
107949552
NCBI-ProteinID:
XP_016739728
UniProt:
A0A1U8NNU1
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Position
D03:13099932..13105983
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AA seq
629 aa
AA seq
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MGLELPKYPEMEEDQVFNFTDSEIVSHVKQALASVLSGDNNSYNQLVGVMHHSKHLAPDE
VALLETTLKALAGAVSSIDITHHDSLLSAIFCMSMWNYGPHVADALAELIVSLAISNGKY
LDLCLGMLVSNFTPPPYFLDKLKMPHGLERKGQVLSRVHAAFKKIADYVPLAPLRLLTIV
LQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTILMAVVDRLIELDVEIGWDAILQD
DFSKGIFEMELEDVDDIEESAEPDVGEFRLSRKSLAGNSIAELLDNLLVLTFEHLESCER
EGRLAKVFETLLQSFRVTVLSAYKSKFAQFVMFYACALDPENCGMRFATMLADLFVQDSQ
PQPTRMSAVSYLASYLSRAKFLAASSISSMLKRLVDWCLEYCEAHDGDINPNAHRVFYSG
CQAIMYVLCFRMKVFVDVPRLKSELLIPLEQVLKHKLNPLKVCLPSVVEEFLRQAKAASL
FTVCKTFIFDGLLESELSRAFGGLERLDTFFPFDPCLLKKCDSFIRPMFVFWSMVKPTYD
DAFDDDDDDDGSSDDDLVQDFVNENEDIMNDEFGKSFDEQGVDMDEFDYALKKMSITPKA
TSNYKFGGRFQEPARMPSRIRPSTSPESL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaattgccgaaatacccggagatggaggaagatcaagttttcaatttcact
gattcagaaatagtttctcatgtcaagcaagctctcgcctccgtcctatccggtgataac
aacagctataatcagcttgttggggtcatgcaccattccaaacatcttgcccctgatgag
gtcgccttactcgagactactttgaaggcactagctggggcagtatcttctatagatatt
actcatcatgactccctcctttctgctattttttgtatgagcatgtggaactacgggcct
catgtggcagatgcattagctgaacttattgtgtcccttgctatttcaaatggaaaatat
cttgatttgtgtctgggtatgcttgtgagcaatttcactccaccaccttatttcttggat
aaactaaaaatgccacatggtcttgagaggaagggacaagttctttctcgggtgcatgca
gctttcaaaaagatagctgattatgtccctcttgcccccttgagattattgaccatagtt
ctccaaggaatgccaacaatttatcataaggaccgagcaatagtaatttatgtggagaac
atgttaaaattagagagtggtgaaattggagaacttgttggaagcacaatacttatggct
gtggtggaccggctgatagaactagatgtggagattggatgggatgccattttacaagat
gactttagtaaaggcatatttgagatggagctagaagatgtggatgacattgaggaaagt
gctgagccagatgttggagagttccgattaagccgtaagagtctagctggaaacagcatc
gctgaactgctagataacctactggttttaacctttgaacatcttgaatcttgtgaaagg
gagggccgcttagctaaggtatttgaaacacttctccagtcatttcgggtaacagttcta
agtgcctacaagtcaaaatttgctcagtttgttatgttctatgcttgtgcattagatcct
gaaaactgtggtatgagatttgccacaatgctggcagatctatttgttcaagactcacag
ccccaaccaaccaggatgagtgctgtatcttatcttgctagctacttatctcgagcgaag
tttctggctgcctcttctatttctagcatgttaaaaaggttggtggattggtgcctggaa
tactgcgaagcccatgatggtgatataaatccaaatgcacatcgagttttctattctgga
tgccaggctattatgtatgtcctctgctttcgaatgaaagttttcgtggatgttccacgc
ttgaagtcagaacttctcataccattggaacaagtcctaaagcacaaattgaatcctttg
aaggtatgccttccatctgttgtggaagagtttctccgacaggcaaaagcagcttctcta
ttcactgtgtgtaaaacgttcatttttgatgggctgctagagtcagaactttcaagggca
tttggtggcctggaaaggctcgacacattctttcctttcgacccttgtttgctgaaaaaa
tgtgacagttttatccgtccgatgtttgtcttctggtcaatggtaaaaccaacatacgat
gatgcttttgatgatgatgatgatgatgatggcagcagtgatgatgatttggttcaggat
tttgtaaatgaaaatgaggatattatgaatgatgagttcggaaagagctttgatgagcaa
ggtgttgatatggatgaatttgattatgcattgaagaaaatgtcgataacacccaaggct
acttctaattacaagtttggtggtcgatttcaagaaccggcaagaatgccttctagaatt
aggccctctacaagcccagagtccttatga
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