KEGG   Gossypium hirsutum (upland cotton): 107949576
Entry
107949576         CDS       T04793                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107949576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107949576
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107949576
SSDB
Motif
Pfam: BRCT BRCT_2 PTCB-BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 107949576
NCBI-ProteinID: XP_016739765
UniProt: A0A1U8NL91
LinkDB
Position
D03:complement(14351592..14356639)
AA seq 367 aa
MSDSKTSQGGGAGKTQTRNLPSWMSSRENESKSHGNKSNDAKGHDKGHASSSNNTNFSKL
LEGVVFVLSGFVNPERSTLRSQALAMGAEYLPDWNSNCTLLVCAFQNTPKFRQVEADCGT
IISKEWILECYAQKKLVDIDPYLMHAGKPWRRSSISHETSEGVLAEKQGSSLTKSYKKVE
ETQSKTTFGPSKNKVSQLAQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAG
EGILTCLQDAIDCLAQKQDVQQITEQWSFIPRVVKELAIFDGSNHGSLTKEDLLREAKVC
KQIYEDELSRINSGSLKRKRPKTDGGEEGNKGETKVIFASGYDSDETIKMTEEEIELAYK
NFNSGTL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtctgattcaaaaacaagccaaggtggcggtgctggaaagacccagactcgaaatctt
ccatcatggatgagttcaagagagaatgaaagtaaatcccatggaaacaagtccaatgat
gctaaaggacatgataaggggcatgcttctagttctaacaacaccaacttttccaaactt
ttggaaggggtggtctttgtattgtcaggatttgttaatccggaacgtagtacattgcgt
tcccaggctttggcaatgggagctgaatatctgcctgactggaattcaaattgcacgctt
ttggtatgtgcttttcaaaataccccgaagtttcgacaagttgaagctgattgtggaaca
attatatcaaaggaatggatattagaatgttatgcacagaaaaagcttgtcgatattgat
ccttacctcatgcatgctgggaaaccttggcgaagaagtagcatttctcatgaaactagt
gaaggggtgcttgcagaaaaacaaggatcgtcattaacaaaatcttacaagaaggttgaa
gaaacacaatcaaagacaacttttggtccctccaagaataaagtatctcagcttgcacag
gacagattttctcctcctaaagtgaagaagtgggtaatggatgattttaatgaaactatt
tcatggctggagagtcaagaggaaaagccagaaccgcaggagataaagcaagtagctgga
gaagggatcttaacttgtttgcaagatgccatagattgtcttgcgcaaaagcaggatgtg
cagcaaattaccgagcagtggagcttcatccctcgtgtggtcaaggagcttgccatcttt
gatggcagtaaccatggctcactcaccaaggaagatcttttgagagaggccaaggtatgc
aagcaaatatacgaggatgaactaagccggataaacagtggttctttgaaaagaaaaagg
ccaaagactgatggaggtgaagaaggcaacaagggtgaaaccaaagtcatttttgcatca
ggttacgacagtgatgaaacaatcaagatgacggaggaagaaatcgagcttgcttataaa
aatttcaattctggaactttgtaa

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