Gossypium hirsutum (upland cotton): 107949593
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Entry
107949593 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107949593 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107949593
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107949593
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107949593
NCBI-ProteinID:
XP_016739797
UniProt:
A0A1U8NL78
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Position
D03:complement(14899337..14906814)
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AA seq
1131 aa
AA seq
DB search
MDMPKQVTVRDLVEEAKKRIVILAICVVGLSYLMSLTSSSVLVNLPAAASLIVLLRYISI
DYEMRRKAAVYNRKSSSMSSLTPKQPPERPKVVDRSDWRRKVNSPIVEDAIDHFTRHLIS
EWVTDLWYSRLTPDREGPEELVLIINGVLGELSDRMKNINLIDLLTRDLINLICTHLELF
RVNKAKIEKQQSIPLTIEHQDAEIRRVMAAENKLHPALFSTEAEHKVLQHLMGGFISFTF
KPEDLQCSFFRYVARELLACAVMRPVLNLVSPRFINERIESAIISMTKAKGVDAAEGASQ
YKSNGSSRIPSDHFSKFLDPSVTGVELVQLKTDQSRAAGGTTATDNLNGAHLMKDPLLSM
DTRSSHSWSSVPLNSQTSAGKGIEQHRTGGEWGDMLDIISCRKTEVLAPENFENMWTKGR
NYKKKEKRLIEQVPRHNSAGSPATVDHSKAISKTREKCPTKLNTSDRCAAQSTLTDQRKI
EKSFLKEASNISYYSSVASCQEDDEHSLVDLEEFESESSDSFTSEEETGTVTGIGSPGTK
VWDGKSNRNLAVSHIHHPLENPEGHMAKKAGGRHVQYRRLTRTPSSRKRSRLTCQKLPVW
QEVDRSSFISGDGQDILNSPNGHEKADDSSNDSETEFFGRLHSGATASLSAASISSYSLT
INSLQNSLVVDSFFKLRCEVLGANIVKSGSKTFAVYSIFVTDVNNNNSWSIKRRFRHFEE
LHQRLKQFPEYKLHLPPKHFLSTGLDVHVIRERCKLLDRYLKNLLQLPTISGSIEVWDFL
SVDSQTYVFSNSFSIIETLSVDLDSNPSEKSDKASSVLVPLAGPLSSKREQLDTESKESA
RQMKPNLARDGLRNAKDMSYPPKVLTKEQGNFIDDSGSNSDTGVSKISFVRHTGKNVKGK
VNDRMEDASELVLDAVSHPTFPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQ
ILQLGMGDAFDDWLIEKIQMLRKGSVVASGIERLEKILWPDGIFITKHPRQQRPPSSSSP
SKASPCSSLPPETCSPRLSDEQQQLEAERRAKFVYELMIDNAPAAIVGLVGRKEYEQSAK
DLYFFIQSSVCLKLLAYDLLELLLLSAFPEMEYVFKQFHVEKHKFGEFKAN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggacatgccaaagcaggtgacggttcgtgacttggtggaggaagccaagaagcggatc
gtgattttagctatctgcgtcgttggattgtcctatctcatgtcactgacaagttcctca
gttttggttaatctgcctgctgctgcctccttaatcgttctcctacgatacatttcgata
gattatgaaatgcggaggaaagctgctgtatacaacagaaaatcttcatctatgagttca
ttgactccaaagcaaccaccagagcgtcctaaagttgttgatcgttctgattggagaagg
aaagtgaattctcctattgtagaggacgcaatagatcacttcacaagacatcttatatct
gagtgggtgacagatctatggtattctcgtttaacacctgatagggaaggcccagaagaa
ctggtgctgatcataaatggtgttcttggggagctttcagaccgcatgaaaaatataaat
ctcatcgatttactcacaagggaccttattaatctcatttgtactcacttggagcttttt
cgagtgaataaagcaaaaattgaaaagcagcaatctataccgctgactatcgaacatcaa
gatgctgaaataagacgtgttatggctgcagagaacaaactgcacccagctttattctct
actgaagctgagcacaaggtgttgcaacatttgatgggtggttttatatctttcacattc
aaacccgaagatctgcaatgttctttctttcggtatgttgccagggaacttctggcttgt
gcagtaatgcgaccagtcttaaacttagtgagtccaaggtttataaatgagagaattgaa
tctgctattatatctatgaccaaagctaaaggagtcgatgctgcagaaggtgcatctcaa
tacaaatcaaatggctcctcaaggatcccttctgatcatttttctaagtttctagatcct
tctgtaactggtgttgaattggtacaattaaaaactgatcagtccagagctgctggaggc
accactgcaacagataacctaaacggagcacatcttatgaaggatccactgctttccatg
gatactcgatcttcccattcttggagctctgtgcctttgaactctcaaactagtgctgga
aaaggtatcgagcaacatcgtacaggaggagaatggggtgatatgttagatatcatttcc
tgtagaaagactgaggtacttgctcctgaaaattttgagaacatgtggacgaaagggaga
aactacaaaaagaaggaaaaacgattgattgagcaagttcctcggcataactctgctggg
agccctgctacagtggatcattcaaaagcaatatctaagacaagagagaagtgtcctacc
aagcttaacacatctgataggtgtgcagctcaatctacattaactgatcagcgcaaaata
gaaaaatcattcctaaaagaagctagcaatatatcgtactactcttcagttgcatcttgt
caggaagatgatgaacacagccttgttgatttggaggagtttgaatcagaaagcagtgat
tcttttacttcagaagaagaaacaggaactgtgacgggtattggttctccaggaaccaaa
gtttgggatggcaagagtaacagaaatctggcagtttcgcatattcatcatccacttgaa
aatcctgagggccatatggcaaagaaggctggtggaaggcatgttcagtatcgaagatta
accagaaccccatccagcagaaaaagatcgagattgacctgtcagaagttgcctgtctgg
caagaggtggataggtctagctttatatcaggggatggacaggacatacttaattcaccg
aatggacatgagaaagctgatgactccagcaatgattctgagactgaattctttggtaga
cttcacagtggagctactgcttctttgtctgctgcttctatctctagttatagtttgact
attaattccttgcaaaactcgttggtggtagattctttctttaaattgagatgtgaggtt
ttgggtgcaaatattgtgaagagtggctccaaaacatttgctgtttattccatatttgtt
acagatgtaaacaacaataatagctggtcaataaagagaagattccgacattttgaggag
ctgcatcaacgccttaaacaatttccggagtataaacttcacttgccaccaaagcatttt
ctctcaacaggtttggacgttcatgtaatacgagaacggtgtaaattgcttgacagatat
ttaaagaatctcctgcagcttcctactatttcaggatcaattgaagtttgggacttccta
agtgttgactcccagacatatgtattctcaaattctttttctatcattgagacattgtca
gttgaccttgacagtaatccatctgaaaagagcgacaaggcctcaagtgttttggtgcct
ctggcgggtcctttatcttctaagagagagcagttagacactgaaagcaaggaatctgca
cggcagatgaagccaaatcttgcaagggatggattaagaaatgcaaaagatatgtcttat
cctccaaaagttctcactaaagaacagggtaacttcattgacgattcaggcagtaattct
gatactggagtgtcaaagatttcatttgtaagacacacggggaagaatgttaaaggaaaa
gtgaatgacagaatggaagatgcttctgagttggttcttgatgctgtttcgcacccaacc
tttcctacagagtgggtgccaccaaatttaagtgtccccattttggatttggtggatgtc
attttccagctccaagatggcgggtggatcaggaggaaggctttttgggtggccaaacaa
atcctacaacttggaatgggtgatgcttttgatgattggctgatagaaaagatccagatg
ctgcgcaagggctcagttgttgcttcaggaatcgagcgtcttgagaagatactttggcct
gatggtatattcataaccaaacatccaaggcaacaacgtccgccatcatccagtagccct
tccaaggcttcaccttgcagttcgctacctcctgaaacatgttcacctagattgagtgat
gagcagcaacaactagaagcagaacgtcgtgcaaaattcgtatatgagctaatgattgac
aatgcaccagctgccattgtgggtcttgttggtcgcaaggagtacgaacaatctgctaag
gacctctatttcttcattcagtctagtgtttgtttgaagctgctggcatatgatcttctt
gagctcttgctgttgtctgcatttccagagatggagtatgtattcaagcagttccatgta
gaaaaacacaagtttggtgagtttaaagcaaactaa
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