Gossypium hirsutum (upland cotton): 107949602
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Entry
107949602 CDS
T04793
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X2
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107949602
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
107949602
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107949602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
107949602
NCBI-ProteinID:
XP_016739810
UniProt:
A0A1U8NLS3
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Position
D03:43955236..43969957
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AA seq
392 aa
AA seq
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MKRDRDEAEEGNEERNKRKMEIVWQTPAHPAQKQDYVFHNGKRHVRPYYFEFVSHVNKRW
EGKTIVDLFAQEFRGRSRDYYVSAVKCGRIQVDGENIPVSYIVKRCQKISHFLHRHEPPV
MAWDVEVLQNEPDVLTVCKPASVPVHPCGQYRKNTVLGILQAEYGLAPLYPIHRLDRLVS
GLLIMAKNPAKADSFRQHIEAGLVQKQYVAKVVGVFLDAEQVVDANIDYNAREGRSTAEV
GISNGDTTLKGKAACTKFTRISTNGIHSIVLCEPVTGRTHQIRVHLQCTGHPIANDMLYL
SDDVVNRSTLGTTADRAAALSGGSPETSCESHKEEYKYCSEDFSIDPMCTHCPNLAPNGY
DGHEEGLWLHCVRYTGPEWVYECPYPDWASLT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagatagagacgaagcagaagaaggaaacgaagagagaaacaaaaggaaaatg
gagattgtttggcaaactcctgctcatcctgctcagaaacaagattatgtttttcacaac
gggaagcgccatgtacgaccttactactttgagttcgtctctcatgttaataaacgatgg
gaaggtaaaacaatagtggatttgttcgctcaagagttcagaggtcgatctagagattac
tatgttagtgctgtcaaatgtggacggatacaagtggatggagagaatatacctgtttca
tacatagttaaacgatgccagaagattagccacttcttacataggcatgaaccaccagtg
atggcttgggatgttgaagttcttcaaaatgaacctgatgtactgacagtttgcaaacct
gcatcagttcctgtacatccatgtggtcaatatcgtaaaaacacagttttgggtattctc
caagcagagtatggattggctcctttgtatcccattcatcgactagatcgtctagtctca
ggactgcttatcatggccaaaaatccagctaaagctgacagtttcaggcagcatatcgaa
gctggactagtgcagaaacagtatgttgcaaaggttgttggagtgtttctggatgctgag
caagttgttgatgccaacatagattacaatgctagagagggaaggagcactgcagaggtt
ggcatctctaatggtgatactaccttgaagggaaaggctgcttgtacaaagtttactagg
attagcaccaatgggattcatagcattgtcttgtgtgaaccagttaccggccgaactcat
caaattcgtgtgcatttgcagtgtacaggtcatccaatagccaatgacatgctttatctt
tcggacgatgttgttaatcgctctacgttaggaacaactgctgatagagctgcagctctt
tctggaggttctcctgaaaccagttgtgagagtcataaggaagaatacaagtactgtagt
gaagatttcagcatcgatcctatgtgtacgcactgtcctaatttagctccaaacgggtat
gatgggcatgaagaaggattatggctacactgtgtgcgttacactggaccggaatgggtt
tacgaatgcccatatcctgactgggcatcactcacttaa
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