Gossypium hirsutum (upland cotton): 107949621
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Entry
107949621 CDS
T04793
Name
(RefSeq) ribonuclease TUDOR 1-like isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
107949621
NCBI-ProteinID:
XP_016739843
UniProt:
A0A1U8NP55
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Position
D03:43746206..43751779
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AA seq
1023 aa
AA seq
DB search
MAASTGGGTGWYKGKVKAVQSGDCLVVMALSSNRPGPPPEKTITLASLISPRLARRGGVD
EPFAWDSREYLRNLCIGKEVIFRVEYSVPSIAREFGSVYLGDKNVAMLVVSEGWAKVRVQ
GQQKGEVSPYVAELLHLEEQAKQQGLGQWSKVPGAAEASIRNLPPSAVGNPSNLDAMGLL
AENKGRSMEAIVEQVRDGSTVRVYLLPDFQFVQVFVAGIQAPSMGRRAVTETVVETDLTS
DKQNGDVSADEPQADLTSAQRLTVSSAPSAEVSPDPFAPEAKYFTEVRCLNRDVRIVLEG
VDKFSNLIGSVYYPEGESAKDLALELVENGLAKYVEWSANMMEDDAKQRLKAAELQAKKT
RLRIWTNYVPPVTNSMAIHDQNFIGKVVEVVSGDCIIVSDDSIPYGSLLAERRVNLSSIR
CPKMGNPRRDEKPAPYAREAKEFLRTRLIGKQVTVQMEYSRKVTMADGTVAAATPASADS
RVMDFGSVFLMSPVKGDGDDASAAVPSGTGNQQPGLNVAELVVGRGFGTVIRHRDFEERS
NYYDALLAAESRAISGKKGIHSAKDPPVMHIMDLTIASAKRAKEFMPFLHRGKRVPAVVE
YVLSGHRFKLLIPKETCSIAFSFSGVRCPGRNEPYSEEAIALLEQWQQQKETEQDSSMVG
QFQQALMRRKIMQRDVEIEVETCDRTGTFLGSLWESRTNMAVTLLEAGLAKLQTSFGIDR
IADAHLLEQAEQSAKNQKLKIWENYVEGEEITNGPAVVDNKQKEVLKVVVTEVVDGGKFY
VQTVGDQRFSSIQKHLASLSIQEAPVIGAFNPRKGDIVLAQFSMDNSWNRALIVNAPGGG
IQSPKDRFEVFYVDYGNQEEVPYSQLRHLDSVSATPGLAQLCSLAFLKVPVLDDEFGTEA
AQFLSEQTLGSSLQFTATVEERNTSGGKVKGRGTGTVLIVTLRAEESELSINEAMLQEGL
ARLEKRKRFEAKERKAMLDELEKYQKEAKTARRGIWEYGDVDSDDEEDTLPPLAAAKKSG
GKR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcaactggtgggggcacgggatggtacaaagggaaagtcaaagcagttcaa
tcgggtgattgcttggtagtaatggccttgtccagtaacaggcctggaccaccacctgag
aaaaccattactttggcatctctcatttctcctagactggcccgcagagggggtgttgat
gagccatttgcttgggatagcagagaatatttgaggaatctctgcataggaaaggaagtt
attttcagagttgaatattcagtaccaagcattgcccgggagtttggctctgtatatctt
ggtgacaaaaatgttgcaatgttggttgtctctgaaggctgggcaaaggttagggtgcag
gggcagcagaaaggggaagttagtccttatgttgctgaattgttacatcttgaagaacaa
gccaaacaacaaggtctgggccaatggagcaaggtacctggtgctgcagaggcttctatc
cgtaatttgcctccatctgccgttggtaatcctagtaacttagatgccatgggtcttcta
gctgaaaacaagggtaggtcaatggaagctatagttgagcaggttcgtgatggtagtact
gttcgagtgtatttgcttcctgattttcagtttgtgcaagtgtttgttgctggtatccag
gccccttccatgggtagaagggctgttacagaaactgttgttgaaacagatttgacctct
gataaacaaaatggagatgtttcagctgatgagccacaggctgacttaacatctgcacag
cggcttactgtctcgtccgcaccttctgctgaagtttcccctgatccttttgcaccagaa
gctaaatattttacagaagttcgttgtctgaatagagatgtacgcattgttcttgaaggt
gttgacaaattcagcaatttgattggatcagtttattacccggaaggcgaatcggcaaaa
gatctcgctttggaacttgtggaaaatggtctagcaaaatatgttgaatggagtgctaat
atgatggaagatgatgccaagcaacggttaaaggctgcagagcttcaagccaagaagact
cggttgaggatctggacaaactatgtacccccagtcacaaactccatggcaatccatgat
caaaacttcataggaaaggtggtggaggttgttagtggggactgcattattgtgtctgat
gattctatcccatacggtagtcttcttgcagaacgccgagtcaatctttcaagcattaga
tgtccaaaaatgggcaatcctcgtagagatgaaaagccagctccttatgctcgggaagca
aaggagtttttaagaacgcgccttattggaaaacaggtgactgtacaaatggaatattcc
aggaaagtcaccatggcggatggaactgtggcagctgctacacctgcatctgcagattca
agggtaatggattttggctctgtcttcctcatgtcccctgttaagggtgatggtgatgat
gcttctgcagcagtcccatctggaactggtaaccagcagcctggcttgaatgttgcagag
ttggtggttgggcgtggctttggcacagtgataagacatagggattttgaggaaagatca
aactattatgatgcccttttggctgctgaatcacgcgctatttctgggaagaaaggaatt
cattctgccaaagatccaccagtcatgcacataatggaccttacaatagcatcggccaag
agagccaaagaattcatgccgtttttgcatcgaggcaagagggttccagctgttgtagaa
tatgtcctaagcggtcatcgttttaagttgttgatccccaaggaaacttgtagcattgcc
ttttcattttctggtgtcagatgtcctggtcgtaatgagccttattcagaagaagccata
gcactgttggaacaatggcagcagcaaaaagaaacagaacaagatagcagcatggttggc
caatttcaacaagcactgatgagacgaaagatcatgcagagagatgtggagattgaagtg
gaaacttgcgatagaactggaacatttttggggtctttgtgggagtctagaaccaatatg
gcagtaacactccttgaggcaggcctggcaaagctacaaacttcatttggtattgacagg
attgccgatgcgcatcttcttgaacaggctgagcaatctgctaagaaccagaaactaaaa
atttgggagaactatgtggaaggagaggaaattaccaacggaccagccgttgttgataac
aaacaaaaggaagtgctaaaggttgttgttacagaagtagtagatggtggaaaattttat
gtccagacagtgggagatcagagattctcatcgattcagaaacacctggcatctttaagc
attcaagaagctcctgtgattggtgcttttaatcccaggaagggtgacattgtccttgct
cagtttagtatggataattcctggaatcgtgcactgattgtaaatgcacctggaggagga
attcaatctccgaaggacaggtttgaagtgttttatgttgattacgggaatcaagaagag
gtcccatacagtcaattacgacatcttgattcagtatcagctactcctgggcttgcccag
ttatgcagtcttgcatttcttaaagttccagtgcttgatgatgaatttggtactgaggct
gcccagtttttgagcgagcagacactaggcagttcactgcagtttactgctactgtagag
gaaaggaatacttctggcggaaaagtgaagggacgaggaactggtacagttctcatagta
acactgcgtgctgaggagtcagagctaagtattaatgaagcaatgttgcaggaggggctt
gctaggttggagaaaaggaagagatttgaagcaaaggagagaaaagcaatgcttgatgaa
ttggagaagtaccagaaggaggcgaaaactgctcggcggggaatttgggagtacggagat
gtggactctgatgatgaggaggatacacttcccccacttgcagcggctaagaaatccggt
ggtaagaggtag
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