Gossypium hirsutum (upland cotton): 107949644
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Entry
107949644 CDS
T04793
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107949644
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107949644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
AAA_14
nSTAND3
AAA_5
Viral_helicase1
ATPase_2
Cytidylate_kin
NACHT
AAA_2
TIP49
ABC_tran
NPHP3_N
AAA_28
AAA_7
RNA_helicase
DUF815
AAA_30
TsaE
AAA_11
RuvB_N
KAP_NTPase
AAA_24
AAA_33
AAA_17
Rad17
SLFN-g3_helicase
nSTAND1
bpMoxR
PduV-EutP
IstB_IS21
AAA_19
NB-ARC
MAD2_N
AAA_3
Cytidylate_kin2
Mg_chelatase
ResIII
SRPRB
nSTAND6
NTPase_1
AAA_13
CPT
Motif
Other DBs
NCBI-GeneID:
107949644
NCBI-ProteinID:
XP_016739865
UniProt:
A0A1U8NLY1
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All DBs
Position
D03:complement(43121614..43128540)
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AA seq
457 aa
AA seq
DB search
MSSPMDISVPNLEGVKISDQNGVPLAPPPASPSNVPHEKFHVSVEVCLKPSSTARPDDVQ
KAVEQMLEKRSLSYVDGPIPVPNDDPFLMENVHRICICDTDEWVKNHDILLFWQVKPIVH
VFQLSEEGPCEELTGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFT
EKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLIEVNAHSLFSK
WFSESGKLVAKLFQKIQEMIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIR
TGIISNIQGSSQYILSDYVTLKEKLNMHEIQEAQTTFHLCKQLAEAAEACEGLSGRTLRK
LPFLAHAELDNPYCCDPNKLLNTMIDTARRERSELPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaatggatatttccgttccaaacctcgagggcgtcaagatctccgaccaa
aacggcgtccctttagcaccacccccggcatcgccttctaacgtgcctcatgaaaaattt
cacgtttccgttgaagtttgcttaaaaccttcaagcacagctcgccctgacgatgtccaa
aaagccgttgaacaaatgcttgaaaagagaagcctgagctacgttgatggtcccattcct
gtgcctaatgatgatccatttctcatggaaaatgtacacagaatctgtatatgtgataca
gatgaatgggtgaaaaaccatgatattcttttgttctggcaagtgaaacccattgttcat
gtctttcagcttagtgaggagggaccgtgtgaggaattgactggggatggccagttgtcc
agcttcaatgaatggatcctaccagctaaggaatttgacggcatgtgggaaagcttaata
tatgaatctggcctaaagcagcggttattgcgttatgcagccagtgcattgctttttact
gaaaaaggtgttgatcctttccttgtgtcatggaaccgcattattcttttacatggtccc
ccagggactggaaagacatctctatgtaaagcgctggcacaaaagctatccattagattc
agctccagatatccacaatgccaattgattgaagttaatgcacattctttgtttagtaaa
tggttctctgagagtggcaaattggttgcaaagcttttccaaaaaattcaagaaatgata
gaagaagaaaacaatctagtatttgttctaattgatgaagttgaaagtcttgctgctgct
agaaaggctgctttgtctggttctgagccttcagattccattcgggttgtaaacgcgcta
ttaactcagatggataagctgaagtcatctcccaatgttataattttgaccacatccaat
ataactgctgctattgatatcgcttttgttgaccgagctgatatcaaagcatatgtgggc
cctccaactcttcaagctcgttatgaaattttaagatcctgcttgcaggagcttattcga
acaggaataatatcaaatatccagggttcaagccaatacatcctttcagactatgttact
ttgaaagagaaattgaatatgcatgagattcaggaagctcaaacaacatttcatctgtgt
aagcaattagcagaggctgctgaagcatgtgagggattgagtggaagaacattgagaaaa
ctaccatttttggcgcatgcagagcttgataacccgtattgttgtgaccctaacaagttg
ttgaacacaatgatagacacagcccggagggagcgttccgaactgcccgactga
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