Gossypium hirsutum (upland cotton): 107949766
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Entry
107949766 CDS
T04793
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107949766
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
107949766
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107949766
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
BESS
Motif
Other DBs
NCBI-GeneID:
107949766
NCBI-ProteinID:
XP_016740005
UniProt:
A0A1U8NLW4
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Position
D03:39645279..39649668
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AA seq
472 aa
AA seq
DB search
MIRATTSVLLWTCIVQLTALGDTWGPHLLKGWPSCFSYQDSSVSVVEDKVPSVPARVLPP
KRVYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWSDPSEFQDIF
DVDHFIMSLRDEVRILKELPPRLKRRVEIGMVYSMPPISWSDISYYHNQILPLIKKYKVV
HLNKTDTRLANNGQPLEIQKLRCRVNFSALRFTSQIEELGKRVVKLLRQNGPFIVLHLRY
EMDMLAFSGCTQGCNSEEVEELTRMRYAYPWWKEKIINSDLKRKDGFCPLTPEETALILR
ALDIDNSYQIYIAAGEIYGGQRRMATLAAAYPKLVRKETLLEPSDLGFFQNHSSQMAALD
YLVSLESDIFIPTYDGNMAKVVEGHRRFLGFKQTILLERRLLVDLIDQYNSGTLSWYEFS
DAVNESHESRKGQPTQRLVIPDRPKEEDYFYANPEECLQPSYSRLDLSVGGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcgccaccacatcggtgttgctttggacttgcatcgtacaattaacggccttg
ggggatacttggggtccacatctccttaaaggttggccttcctgtttttcttaccaggat
tcttccgtttccgttgttgaagataaggttccctccgttcctgcccgtgttcttcctccc
aaaagggtatataagaacaatggttacttgatggtttcttgcaatggaggtctcaatcaa
atgcgagcagcaatttgtgacatggttaccattgcaagatatttgaatgtcacacttata
gtcccggagctggataaaacatctttctggtcagatcccagtgaatttcaagatatattt
gatgtggatcatttcattatgtcattgagagatgaggtccgtatattgaaggagttgcct
cctaggcttaagaggagagtagaaatagggatggtgtattctatgccaccaattagttgg
tcggatatatcctactaccataaccagattcttcctctgataaagaagtataaagttgta
catttgaataaaactgatactcgacttgccaacaatgggcagcctttagaaattcagaag
ctgcgatgtcgtgtaaattttagtgctttgagattcacttcccagatagaggagttgggg
aaacgagttgttaagcttctgaggcaaaatggtccttttattgtacttcaccttagatat
gaaatggacatgttagcattttctggctgtacccaaggttgcaacagtgaggaggtggag
gagttgacaagaatgagatatgcttatccatggtggaaagaaaaaataataaactctgac
ctgaaaaggaaagatggtttctgccctttgacgcctgaggaaactgcccttattttgagg
gcattggacatagataacagttaccaaatctatattgcagccggtgaaatatatggcgga
caaaggagaatggctactcttgctgcagcttatccaaaattggttagaaaggagactcta
ttggagccatcagaccttgggttctttcaaaaccattcatcccagatggccgcgttagat
taccttgtttcattggagagtgatatttttattcctacatatgacggaaacatggctaag
gtagttgaaggccaccgcagatttctggggttcaagcagacaattttattggagagaagg
cttttggttgatctgattgaccagtacaatagtggaactctgagttggtatgagttctca
gatgctgtgaacgaatctcatgaaagtcgcaaggggcaaccaactcagaggttggtgatt
cctgacaggcctaaggaagaggattacttctatgcgaatccagaagaatgcttgcagcca
tcatatagtcgattagatctttctgttgggggattgtga
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