Gossypium hirsutum (upland cotton): 107949837
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Entry
107949837 CDS
T04793
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107949837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107949837
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107949837
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107949837
NCBI-ProteinID:
XP_040931668
UniProt:
A0ABM2YMB3
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Position
A08:complement(6008807..6013783)
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AA seq
587 aa
AA seq
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MPKRLAYSLPDEVLEHVFSFIQSDKDRNVVSAVSKSWYEIERWCRRKIFVGNCYAVSPKM
VIRRFPQVRSIELKGKPHFADFNLVPDGWGGYVLPWITEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKDFKVLVLASCEGFSTDGLAAIAVSCKNLRELDLRESEVDDSSVHWLSHFP
ETYTSMVSLNISCLGSDEVSFSALERLVSRCTNLRSLKLNRAVPLDKTANILRLAPQLVE
FGTCTYSAELRSDVFSNLAGAFSNCMELRSLCGFWDVVLDYLPAIYSVCSRLTSLNLSYA
TIQSLDLIKLVSHCPSLQRLLVLDYIEDSGLEALASNCKDLQELRVFPSDPFDAEPNASL
TEQGLVAVSLGCPKLQSVLYFCRRMSNAALVTIAQNRPNLTRFRLCIIEPNTTDYLTGEP
FDVGFGAIVEHCKDLIRLSLSGLLTDCVFEYIGKYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLTNAAKLETMRSLWMSSCSVSFGACKLLSQKKLRLNVEVID
ERGPPDSRPENCTVDKLYIYRSVAGPRFDMPPFVWTKDEDLALRLSP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagattagcgtattcgctcccagatgaggtgctggagcatgtattctcgttc
atacaatcggataaagatcggaacgtggtatcggcagtgagtaaatcgtggtacgagatt
gagcggtggtgtcggaggaagatattcgtcgggaactgttatgctgtgagccctaagatg
gtgatcagacggttcccgcaagttagatccattgagttgaaagggaaaccgcacttcgct
gacttcaatttggtaccggacggctggggcggttacgttttgccgtggattacggagatg
gctggcgcttacccttggctcgaagagattcggcttaaacggatggtcgtcacggatgaa
agcttggagcttattgctaagtcatttaaggatttcaaagtattggtgcttgcttcttgt
gaagggttttcaactgatggacttgctgccattgctgttagttgcaagaacctgagagag
ctggacttgcgagaaagtgaagtggatgattcgagtgtgcattggctcagccattttcct
gagacatacacatccatggtgtctcttaacatttcctgtttaggatcagatgaagttagt
ttttcagctttggagcgcctggtcagtagatgtacgaacctcaggtcccttaagctcaac
cgcgctgttccccttgataagactgcgaacatattacgacttgcaccgcagctggttgaa
ttcggcacttgcacctattcggctgagctacgttcagatgtcttctcaaacttggctgga
gctttttctaattgcatggaactaaggagtttgtgtgggttttgggatgtggttctggat
taccttccagctatttactctgtctgctctagattaacgtcactgaacttgagttacgca
actatacaaagccttgatctcatcaagcttgtaagccactgtccgagtttgcagcgccta
ttggtacttgattatattgaagacagtggccttgaagcacttgcatctaattgcaaggac
ctgcaggaattacgggtttttccatctgacccgtttgatgcagaaccaaatgcatccttg
acagaacagggccttgttgctgtttctttgggttgtcctaagttacaatcagttttgtac
ttctgccgcagaatgtctaatgcagctctagtcacaattgctcagaaccgtccaaacttg
acccggtttcgtctttgtataattgagccaaatacaactgattacctgaccggagagcca
tttgatgttggttttggagccattgttgagcattgcaaggatctcatacggctttccctg
tccggtctcctcacagattgcgtgtttgaatatattggaaaatatgcaaaaaagctggaa
atgctatccgtggcttttgcaggagatagtgatttgggactccatcacgtgctttcaggg
tgtgaaagcctacggaaactagaaattagggactgccccttcggagacaaggctcttttg
accaatgctgcaaagctggagacaatgcgatccctttggatgtcttcctgctccgtgagt
ttcggagcttgtaagctgctaagtcagaagaagctgaggctgaatgttgaagttatagat
gagaggggacctcctgattcaagacccgaaaactgcacagttgataagctctatatctac
cgatctgtggctgggccaaggtttgacatgcctccttttgtttggacgaaggatgaagat
ttggctttgaggctttctccatag
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