Gossypium hirsutum (upland cotton): 107949838
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Entry
107949838 CDS
T04793
Name
(RefSeq) ruvB-like 2
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107949838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107949838
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ghi03037
]
107949838
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107949838
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
107949838
Chromatin remodeling factors
SRCAP complex
107949838
INO80 complex
107949838
INO80 complex (yeast)
107949838
SWR1 complex
107949838
ASTRA complex
107949838
Cilium and associated proteins [BR:
ghi03037
]
Motile cilia and associated proteins
Dynein assembly factors
107949838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
Mg_chelatase
AAA_25
ATPase
Zeta_toxin
TsaE
AAA_17
bpMoxR
nSTAND3
AAA_18
TiaS_TCKD
AAA_7
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
107949838
NCBI-ProteinID:
XP_016740101
UniProt:
A0A1U8NM52
LinkDB
All DBs
Position
D03:37653865..37656301
Genome browser
AA seq
465 aa
AA seq
DB search
MTELKLSESRDLTRIERIGAHSHIRGLGLDSSLEPRDVSEGMVGQAQARKAAGVILQMIK
DGKIAGRAILLAGQPGTGKTAIAMGMAKSLGLETPFSMLSGSEIFSLEMSKTEALMQAFR
KSIGVRIKEETEIIEGEVVEIQIDRPAVSGAASKTGKLTLKTTDMETVYDLGAKMIEALG
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHSVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITSIRGTNYKSPHGIPIDLLDRLLIITTQPYS
EDEIRKILDIRCQEEDVEMSEDAKQLLTKIGHETSLRYAIHLITASALNCRKRKGMVVEV
QDITRVYSLFLDVRRSTQYLMEYQKEYMFNEASIVDGGDADAIHD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctgaaactctccgagagccgagacctgacccgaatcgaacgcattggggct
cattcccacatacggggcctaggcctggactcctctctggagccccgtgacgtctcggaa
ggaatggtgggccaagcacaagctcgtaaagccgccggtgtcatcctccaaatgatcaaa
gacggtaaaattgctggccgtgctatcttattagcgggacaacctggaactggcaaaact
gccattgccatgggcatggcgaaatctcttggccttgaaacccctttctcgatgctctct
ggcagcgaaatcttctcccttgagatgtcgaaaaccgaagctttaatgcaagcgtttcga
aagtccatcggagtaagaatcaaagaagaaactgaaataatcgaaggcgaagtcgttgaa
atccagattgaccggccggcagtttctggggcggcttcaaaaactgggaaattaacgctt
aaaacgacggatatggagaccgtttacgatttgggggcgaagatgatcgaggcattaggg
aaagagaaagtgcagagtggagatgtgatagctattgataaagcttcaggaaaaataacg
aagcttggaaggtcattttcaaggtcgagggattacgatgctatgggtccgcaaacaaag
ttcgtgcaatgtccagacggagagttgcagaaaagaaaagaagtcgtccattctgttacg
cttcatgagatcgatgttattaacagcagaacccagggatttctagctcttttcactggg
gatactggtgaaatccgtgctgaggtgagagaacaaattgacacgaaggtggcagagtgg
agggaggaagggaaggctgaaatcgtgcctggtgttctctttatcgatgaggtgcacatg
cttgatatcgagtgcttttctttcctgaaccgtgctcttgagaatgagatggccccgata
ttagtcgttgctacaaatagaggaataacttcaatccgtggcacaaattacaaatcccct
catggaattccaattgatcttcttgatagactactaatcatcactactcagccttattct
gaggatgaaattcgtaagattctagacatcaggtgccaagaggaagatgtagagatgtct
gaagatgcaaaacaactgttgaccaaaattgggcacgagacctccttgagatatgctatc
catctgatcacggcttctgcattgaattgccggaagcgaaaggggatggttgtggaagtg
caggacatcactcgtgtttacagtctatttctggatgtaaggagatcaacgcagtacttg
atggagtaccaaaaagaatacatgttcaatgaagcatcaattgttgatggtggggatgct
gatgccatacatgattga
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