Gossypium hirsutum (upland cotton): 107949840
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Entry
107949840 CDS
T04793
Name
(RefSeq) tRNase Z TRZ1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107949840
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
107949840
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107949840
Prokaryotic type
107949840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
107949840
NCBI-ProteinID:
XP_016740103
UniProt:
A0A1U8NPV1
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Position
D03:37635776..37638950
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AA seq
300 aa
AA seq
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MDKRGAKSKSPEPGNQGNDEKKSKKGLEIEGYRVEGLSIGGHETCIIFPTLNLAFDIGRC
PQRALSQDFLFISHGHMDHIGGLPMYVATRGLYGMKPPTIVVPTCIKEDVEKLFEVHRKM
DQSELKHNLIGLDVGEEFFLRRDLKVRAFRTYHVIPSQGYVVYSVKQKLKDEYMGLSGNE
IKNLKSSGVEITYTTTTPEVAFTGDTMSDFIVDEANLDVLRAKILVVESTFVDNSVSVEH
ARDYGHVHLSEIINYADKFKNRAILLIHFSARYALETIQEAIAALPSPLAGRVFALTEGF
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaggggtgcaaaatcaaagagcccagaaccaggaaaccaaggaaacgatgag
aaaaagagcaaaaagggattggaaattgaagggtaccgagtggaagggttgtcaatagga
gggcatgaaacttgcattattttccccactcttaacttagcatttgatatcggtcgatgc
ccacaacgtgccctttctcaagatttcctttttatttctcatggccatatggaccatatt
ggtggcctgccaatgtatgtcgcaacacggggtttatatggcatgaagcccccaacaatt
gttgtacctacttgtataaaagaagatgtagagaaactctttgaggtgcatagaaagatg
gatcaatcagagcttaagcataatttaatcggcttggatgtgggagaagagtttttcttg
agaagggatctaaaagtaagagcttttagaacttaccatgtcataccgagccagggttat
gtagtttattctgtaaaacaaaaacttaaagacgagtacatggggctttctggaaatgag
atcaagaacttgaagtcatcaggtgtggagattacttacactactacgacaccagaagtt
gcctttactggagatacaatgtctgacttcatagttgatgaagctaatttagatgttttg
agggcaaagattcttgttgtggagagcacatttgtagataactcagtatcggttgagcat
gccagagattatggacacgttcatctgtctgagataattaattacgcggacaagttcaaa
aacagagcaattcttttgattcacttctcagctcggtatgcattagagactatccaggaa
gcaattgcggcgctgccttcacctctggctggccgagtttttgcacttacagaaggtttc
taa
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