KEGG   Gossypium hirsutum (upland cotton): 107949864
Entry
107949864         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107949864
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107949864
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 107949864
NCBI-ProteinID: XP_016740124
UniProt: A0A1U8NQ79
LinkDB
Position
D03:13803268..13804751
AA seq 328 aa
MVGLTVAVILDSTIEVEKSKKDRGMPWWAKFRSFRVVDSNSCNCGCLESGGVIDVGGVID
VVAKFGAKADDKTNFNGPCKALIELQVEGTVKAPIDPSAFKEPKWIAFNRIENFKLSGGG
VFDSQGTTAYKREGCEKHDYCESLPIQEFHVNFLVCRNINFEHFTVYTPGESPNTDGIHI
GRSNGVNVLNTDIKTSDDCVLIGDGSKNLVINGVTCRPGHDISIGSLELFKNEEPVDRVT
VKNCTMTNTCNGVRIKGWPGAEPGTCSNIHFEDILHCENLELANIEITYSGPTRPAVSQC
FKVKPKVSGKQNPAACFAPIPAKPTPTT
NT seq 987 nt   +upstreamnt  +downstreamnt
atggtgggattgacggtggcggtgatcttagacagcacgatagaagtggagaaatcaaag
aaagatagagggatgccatggtgggctaagtttagatcatttagagtagtagacagcaat
tcgtgtaattgtggatgcttggaaagtggtggtgttattgatgttggtggtgttattgat
gttgttgcaaagtttggtgcaaaggcagacgacaaaacaaatttcaatggtccttgcaag
gctcttattgagctccaagttgaaggcactgtgaaggctccgatagaccctagtgctttc
aaggagcctaaatggattgccttcaatagaattgaaaatttcaaattgtctggcggagga
gttttcgacagccagggaaccactgcttataaaagggaaggttgcgaaaagcatgattat
tgtgagtcacttcctattcaagagttccacgttaattttctagtatgcagaaacattaat
tttgaacatttcactgtatatacacctggagaaagcccaaacacagatgggattcacatc
gggagatcaaatggggtcaatgttcttaacacggatataaaaactagtgatgattgtgtt
ttaattggggatggttccaaaaatttggttatcaatggagtaacttgtagaccaggacat
gatattagtattggcagtctcgaattgtttaaaaatgaagaacctgttgatcgagttaca
gtaaaaaactgcaccatgactaatacttgcaacggtgttaggatcaaaggttggccaggt
gctgaacccggcacttgttcgaacattcactttgaagatattttgcattgtgaaaatttg
gaacttgccaacattgaaattacgtacagtggaccgactagacctgcagtatcacaatgt
tttaaagtgaagcccaaagttagtggcaaacaaaatccagctgcatgtttcgcccctatc
ccagcaaaacctaccccgactacttaa

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