Gossypium hirsutum (upland cotton): 107950090
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Entry
107950090 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107950090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107950090
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107950090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
107950090
NCBI-ProteinID:
XP_016740326
UniProt:
A0A1U8NMV8
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Position
A08:7043802..7047741
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AA seq
479 aa
AA seq
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MSESGSKLFIGGISWGTDEDRLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
ERVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIHGSPSPGPTRKIFVGGLTSTVTES
DFKKYFDQFGNIIDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKNFHELNGKMVEVKR
AVPRELSPGPSRSPLGGYNYGLNRVNNFFNGYTLGYAPSSVGGYGLGMDGKFSAVAGGRS
GFSPFGASYGISMNFEPGLNLNFGNGANFSGNMSYGQGLNPYYNGNTNGLDSPIGHDRSS
GGSTSFFSSATRNLWGGNGGLNYNTNAASSGAYMGSGSGSLRGNALGNSGTNWGSSAISG
QGGRDNISGNSVNFGNGNGDNNFGLGTAGYERNIGTNVVPASSYTASNGGYDASFANLSA
SASIYGDTTWQSSTSVRDSSGTFGYGLDSATSDVMRKSSPGFIGGYNVNKRQANRGIAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagtggtagtaagctttttattggtgggatatcttggggcaccgatgaagac
cgtctcaaggagtatttcagtagttttggtgaagtagtagaggcagtgatcatgaaggac
cggaccacagggcgtgctcgtggttttggtttcgttgtttttgctgaccccgctgttgct
gagagagttatcaaggagaaacacaatattgatggcaggatggtcgaggcaaaaaaggca
gttcctagggatgaccagaatattatgagtagaagcactagtagcatccatggttcacct
agtccaggtcccacaagaaagatttttgtaggaggcttaacctcgacagtcacggagagt
gacttcaagaagtattttgatcagtttgggaatatcatagacgttgtggtaatgtatgat
cataacacccaaagaccgaggggttttggattcatcacttatgattcagaagaggcggtt
gacaaagtgttactaaaaaatttccatgaactgaatggtaaaatggttgaggttaaaaga
gcagttccccgagagttatcacctggtcctagtcgcagccccttaggtggatataactat
ggtctgaatagggtcaacaacttttttaatggctacactctgggatatgctccaagcagt
gtaggtggctatggacttgggatggatggtaaattcagcgcagttgctggtggtcgaagt
gggttttctccttttggtgccagttatggaataagcatgaactttgagccagggttgaac
ctgaattttggaaatggtgcaaattttagtggtaacatgagctatggacagggattgaac
ccgtactataatggtaatacaaatggacttgatagtcctattgggcatgatagaagtagt
ggaggtagtacttcttttttcagctcagcgactcggaatctttgggggggaaatggggga
cttaattacaacacaaatgctgctagttccggtgcatatatgggatctggaagtgggagt
ttaagaggaaatgccttgggaaacagtggaactaattggggttcttctgccatttcaggt
caaggtggaagggataacatttctggcaatagtgtgaattttggcaatggaaatggtgat
aacaactttgggttaggaacagcagggtatgagagaaacattgggaccaatgtggtacca
gcatcatcatatacagcatcgaatggtggttatgatgcatcctttgcaaacctttctgca
agtgcttccatttatggggataccacttggcaatcatcaacatctgtgcgagacagttct
ggcactttcggctatggacttgatagtgccacttctgatgttatgcgtaaaagttctcct
ggttttattggtggttataatgttaataagagacaagcaaatagaggaattgcaacctag
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