Gossypium hirsutum (upland cotton): 107950120
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Entry
107950120 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107950120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107950120
03036 Chromosome and associated proteins [BR:
ghi03036
]
107950120
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107950120
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107950120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107950120
NCBI-ProteinID:
XP_016740371
UniProt:
A0A1U8NN07
LinkDB
All DBs
Position
D03:36243834..36252801
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AA seq
1019 aa
AA seq
DB search
MFGTTNPFGQSSSSPFASQSVFGQTSASSNPFAPKPSFGSPNPFGSQTGGSVFGGTSTGV
FGAAQSSSPFSSTTTFGASSSPAFGSSTPTFGSSSSSFGGSSVFGQKPAFGFGSSPTQSN
PFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPAFGAASTPAFGASSTPG
FGATSTPAFGASSTPAFGATSTPAFGATSTPAFGSTGSPAFGSTGTVFGVSNAPVFGTGG
TFGSSSSPAFGTSTTPAFGASSSAFGGSSTPAFGASSTPSFSFGSSPAFGQSAPAFGSSP
FGTTSFGAQSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGSGQPGAK
LESISAMPVYKDKSHEELRWEDYQLGDKGGPQPAAQATGGIGFGASTVSTSPFGSSTFGQ
TSANPFSSSSTNPFSLKPPSFNSTGFATSTTTSNPFQPTSSSLFGQASSTSLFSSSSTPT
FGTGSSLFGSSVTPSFSSSPSIFGTGAAPATTSAFATGLNFGSSQTSPLFNSSPAIGQTG
NAFGQMTSTFGQNTGNFGQTSIFNTPSTGFSGNMFSSSLSLAPSNPAAFGPTTPSFASPF
QPAQTSGAFSFSNFGQTQPGGGSGIFGQSNIGLSSATQTAAVVQPGTIINPYGTLPAMPQ
MSIGQAGTAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRLPARKYHPNNNGPKV
PFFNADEETPNTPKADAVFIPRENPRALIIRPTESWPSRASAEKASPLKVTSAAVHENGK
ISDGSSNAEDKNENPAENGHVKERIHPVKGNQKANGVHDDHSAQKESYMTLNGHRAGEAA
IVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCQHVKDFVVGRHGYGSIKFL
GETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKRTGQQYT
DGPKIEKYKEMLKRKAKDQGAEFISYDPIKGEWKFRVNHFSRYKLEDEDDVKMWGVADS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaatccttttgggcaatcatcaagtagcccatttgcatcccaatct
gtttttgggcagaccagtgcaagtagcaatccatttgcacctaaaccttccttcggtagt
ccaaacccttttggttcccaaacagggggttcggtatttggaggtacttctactggagtg
tttggtgcggcccaatcttcttctcccttctcctcaacaaccacctttggtgcctcttca
tctccagcttttggttcatctactcccacttttggcagttcatcatcatcttttggtggg
tcttctgtttttggtcagaagcctgcatttggctttgggtcaagtcccacccaatcaaat
ccttttggaagcacaaatcagcaatcacaacctgcatttggtagtggtatatttggttcc
tccacaccttttggttcaactcagtcagcgtttggttctagtcctgcctttggttccact
agtagcccggcttttggtgcggcaagcacccctgcgtttggcgcctcaagcactccaggt
ttcggtgccacaagcacccctgcgtttggtgcctcaagtacccctgcttttggtgccaca
agcacccccgcgtttggtgccacgagcacccccgcatttggttcaactggaagtccagca
tttgggagcactggaactgtatttggtgtgtcaaatgccccagtctttggaactggaggt
acatttgggtcatcaagctcacctgcatttggcacttccacaactcctgcttttggagct
tcaagttctgcttttgggggttcaagcactcctgcttttggagcatcttctactccatcg
ttcagctttgggtctagcccagcttttggccaatcagcgccagcatttggtagtagtcca
tttggaacaacctcatttggagcccagagttctcctttcggaagtcaatcttctgcccca
gcatttggaagcactagtctcggccagtctccttttggaggtcaacgagggggaagtaga
gtagctccgtacacacctacaactgatgcagatagtgggagtggacagccaggtgcaaag
ttggagtcaatttcagcaatgcctgtttataaagataaaagtcacgaggagctgagatgg
gaggattatcaattaggagataaaggtggaccgcagccagctgctcaggctactggaggg
attgggtttggtgcgtcaactgtatctacaagtccttttggttcttcaacatttggccaa
acatctgcaaatcctttttccagctcaagtaccaacccatttagtttaaaacctccatcc
ttcaatagtacaggttttgcaacctcgactactacatcaaacccctttcaaccaacatca
tcaagcctttttggccaagcttcttcaacttcattatttagttcatcatctactcctaca
tttggaaccggttcatcactttttggctcatctgtcactccttcattttcatcttcaccg
tccatttttggtactggtgcagctccagcaacaacttcagcatttgccacaggcttaaat
tttggcagcagtcagacatcacccctgttcaattcttccccggcaattggacagacaggc
aatgcttttggccagatgacctctacctttggacagaatactggtaacttcggtcaaaca
agcattttcaacacaccttccactggatttagtgggaatatgttttcaagctcactatca
ttggctcctagcaacccagcggccttcggcccaacaactccatcttttgcttcacctttt
caaccagctcagaccagtggtgctttcagctttagcaattttggtcagacacaaccaggt
ggcggatcaggcatttttggtcagagtaatattggcctatcgtctgctacacagactgct
gctgtagtacaaccagggactattataaacccctacggaacactccctgcaatgcctcaa
atgtcaattggtcaggctgggactgcaccgtctgttcagtatggaatttccagcatgcct
gtggtggacaaacctgctcctgctagaatatcgcctttattgacttctcggtacctttcc
caaaggcggattaggttgcctgcaaggaaatatcatcctaataataatggtccaaaggtt
ccatttttcaatgctgatgaagagacacccaacacacctaaggctgatgctgtttttatc
cctagggaaaatccaagggctttgatcattcgtcccacagaaagttggccttcaagagct
tctgctgaaaaggcatctccattgaaggttacatccgctgctgtgcatgagaatggcaaa
atttctgatggtagctccaacgctgaggataaaaatgaaaatccagccgaaaatggccat
gtgaaggagcgaattcatccagtcaaaggtaaccagaaagctaatggagtccatgacgat
cattctgctcagaaagagtcatacatgacactcaatggccacagagctggtgaggctgct
attgtctacgagcacggggcagacattgaggctttaatgccaaagcttaggcggtctgat
tactatacagaacctcgaatccaagaactggctgcaaaggaaagggctgaaccagggtac
tgtcagcatgtcaaggattttgtggttggacgacacggttacggaagcatcaagttcctg
ggtgagacagatgtgagacgtcttgatttggagtcccttgtgcagttcaacaaccgcgag
gtaatagtttacatggatgatagcaagaaacctcctgttggacaaggtctcaataagcct
gcagaggtaacacttcttaacatcaagtgttttgataaaaggacaggacagcagtataca
gatggtccaaaaatcgagaaatataaggaaatgcttaaaaggaaagccaaggaccaagga
gctgaatttatttcctatgatcccatcaaaggagagtggaaattcagggttaatcacttc
agcaggtataagttggaagatgaagatgatgtcaaaatgtggggtgttgcagatagctga
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integrated database retrieval system
