Gossypium hirsutum (upland cotton): 107950305
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Entry
107950305 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107950305 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107950305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107950305
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107950305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
107950305
NCBI-ProteinID:
XP_016740609
UniProt:
A0A1U8NRM2
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Position
D03:complement(48543201..48551183)
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AA seq
1367 aa
AA seq
DB search
MMAIEKSNSKVSPFDSEFSPGSREMTVSSDEDELQRPSSAVDSDDEFDDDADSGAGSDDF
DLLELGETGAEFCQVGNSTCLVPFELYDLPGLEDILSLDVWNECLSDEERFSLTKFLPDM
DQDTFMRTLIDIFNGNNLHFGSPIKSLFDMLKGGLCEPRVALYREGMNFFRKRQHYYHLR
KHQNTMVVNLIQMRDAWLNCRGYSIEERLRVLNIMRSQNSLMYEKLEDKDSASSDGEDLV
DGFWSKRVKDWKAPQKSGRYSGFGVEPVLEFASRGQLMDLEPSKYRKQNPKGKLKTGESK
LPFAREFGSRFSPDLDMNSEPYGLPGTLPREKYESAALRARDWMRLDDAEDPMFGTGIQR
NQNALDDSIMGKSGSLRARKKYNLLRGEELATDSFMASPLSSKHAFLSYGRNRNANASKP
PNMRTSYNFPKKSKRFKNDPLFAAGDQIKSIKGRIPSLPLQGSRVDLSERTELFWQNENQ
GEDFSVDLSVRPDDWNIKHKKWKTLRESPDLSFKSYKASSPLMSDQFLKSDSRKKTSQEK
IRGNYLQNGGAVMALSKGSRAFIKNEETESDSSEQFDDEKESNPLMRGKLAYTSGIVENP
RLSSLNSGLDSKKTKSSKKYTMKDGWPLDGMNRYFKKSFEENVHVAGVESYYSERKQKGK
MHESSPLPNSGSRVFDEVGGKQVSKLVKNGHLRGEPGDRLRRSSLRAYPTEKRQNGELAY
DHFITQSNYQHDYLDEEDGSPVALSLADEFNLGRTGKKRQNTEAYDRCEKSEASLLGSNK
VTKKKKGKRYMEDVNGRGEDGNVQPNPQQQTDDSPFVKKKGKRKLEVDTVTSDMEPSEPH
GADLGTTDLEMETKPQKKPFTLITPTIHTGFSFSIIHLLSAVRMAMITPFPEDSLEVGKP
REEQNGKQQGDLNGVLSCDNTVTNSSDHLVQPSVPFLTVHDIVHRVAVNPGDPCILETEE
PLQDLVRGVLKIFSSKTAPLGAKGWKVLVAYEKSTKSWSWVGPAMHSSNNVETAEEVISP
EAWGLPHKMLVKLVDSFANWLKNGQETLQQIGSLPAPPLELMQVNLDEKERFRDLKAQKS
LNTISSSSEEVRAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHF
MLKRDRPPHVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYVVEEVSDAQVNQIVSGAL
DRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRPKKDTAEQSDQVAVT
VAFHDTGDQSGFELGSELNVEHSCIDNDKKMEMECCDRQNAEDNADSSHESEQCTTQQDH
PMTLEPPDLNPVQDGELQCQENSTNEDIDDIDDGREKPVEHLDASLL
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagagtaattccaaagtttcaccctttgattcggagttttcgcct
ggtagtagagagatgactgtgtcaagtgatgaggacgagcttcaacgtccaagctcagcc
gttgattctgatgatgaatttgacgatgatgctgattcaggagcaggttcggatgacttt
gatttgttggaattaggtgaaaccggggctgaattttgccaagtcgggaactcgacctgt
ttggttccttttgagttatatgatcttcctggattggaagatattttgtctcttgatgtg
tggaatgaatgtttaagtgatgaagagaggtttagccttactaagtttttacctgatatg
gatcaggatacctttatgcggaccttgatcgacatttttaatggtaataatcttcacttt
gggagtcctattaagagtttgtttgatatgttgaaaggagggttgtgtgagccgagggtt
gcactttatcgggagggcatgaatttctttcggaagcggcagcattactatcatctgagg
aagcatcagaatactatggttgtcaatcttattcaaatgagggatgcttggcttaattgt
aggggatacagtattgaggagcggcttcgtgttttgaatattatgagaagtcaaaatagt
ttgatgtatgagaagttggaagataaggattctgcatcctctgatggagaggatttggtt
gatggtttttggagcaaaagagttaaggactggaaagctccacagaaatcaggtcgctac
tctggctttggggttgaaccagttttagagtttgcatcgcgaggacagctgatggatttg
gaaccatcaaaatacaggaagcagaatccaaaaggcaaactgaagacaggtgagtcaaaa
cttccttttgcaagagagtttggcagccgcttttcccctgatttagatatgaattctgag
ccatatggtttgccaggaacacttcctcgagagaaatatgagtctgcagcactcagggca
agggattggatgaggttagatgatgctgaagacccaatgtttggaacaggtattcagcga
aaccaaaatgctctcgatgatagcatcatgggcaaatctggttctttgagagcaaggaag
aagtacaatcttttaagaggggaagaattagccactgatagtttcatggcttcgcctttg
tcttcaaagcatgctttcctttcctatggtaggaataggaatgcgaacgcttcaaagcct
cctaatatgagaacatcttataattttcccaaaaagtccaagcgtttcaaaaacgaccca
ctatttgcagccggagatcaaataaagtctataaaaggccgaattccttcactgccattg
caagggagtcgagttgacttatctgagcgcactgaactgttttggcaaaatgaaaaccaa
ggagaagatttctctgtggatttgtctgttagacctgatgattggaatattaagcacaag
aaatggaaaacactgcgggagtctcctgatctcagttttaaatcttataaagcttcctca
ccactgatgagtgaccaattcttgaaatctgacagtagaaagaaaacatcgcaggagaag
attagagggaactatttgcaaaatggaggagcagttatggccctttcaaaaggtagtaga
gcatttattaaaaacgaagaaacagaatctgactcatctgagcaatttgatgatgagaag
gagagcaaccctctaatgagaggcaagttggcatacaccagtggcatcgtagaaaatcct
cgcctgtcttcattgaattctggccttgattctaagaagaccaaatcttcaaagaaatat
actatgaaggatggatggcctcttgatggaatgaaccgctacttcaaaaagagctttgag
gaaaatgtgcacgtggccggagtagaaagctactattcggaaagaaaacagaagggtaag
atgcatgaaagcagtcccttgcctaactctggttctagagttttcgatgaggttggtggg
aaacaagtttccaagttggtcaagaatggccatttacgaggggaacctggtgacaggtta
cgtaggtcctcattgagggcctaccctactgagaaaaggcagaacggtgaacttgcctat
gatcattttattactcagtcaaattatcagcatgattatcttgatgaggaggatggttca
cctgtggcactatcattggcagatgaatttaacctgggtagaactgggaagaaaagacag
aacactgaagcatatgatcgctgtgagaagtctgaagcttcgttgctagggagcaacaaa
gtgacaaagaagaagaaagggaagaggtacatggaagatgtcaacggaagaggtgaagat
ggcaacgtgcagcctaacccccagcagcaaactgatgattctcctttcgtgaagaaaaag
ggaaaacggaaattggaggttgatacagttacttcagatatggaaccttctgagcctcat
ggtgcagatctgggaaccacagatttggagatggaaaccaaaccacagaaaaagccattt
actttgattacccctaccattcatactggattctcattctcaattatacatcttctttct
gcagttcgtatggcaatgattactccatttcctgaagattccttagaggttggtaaacct
agagaggagcagaatggaaagcagcaaggtgatctgaatggggttctctcatgtgacaac
acagttaccaacagttcagaccatcttgtgcaaccaagtgtgccttttcttaccgttcat
gatattgttcatcgcgtggcagtaaatcctggagatccgtgtatccttgagacagaagag
ccgcttcaagatttagttcggggagttctgaagattttctcatcaaaaacagcacctttg
ggagcaaaaggttggaaggtacttgttgcctatgagaagtccacaaaaagctggtcttgg
gttggccctgctatgcatagctcaaacaatgttgagactgctgaggaggtgatatcaccc
gaagcctggggtcttcctcacaaaatgcttgtcaagttggttgattcttttgcaaattgg
ctaaaaaatggtcaagagactctccaacaaataggaagtcttcctgcacctccgcttgaa
ctgatgcaagtcaacttagatgagaaagaaaggttcagagacctaaaagctcagaaaagc
cttaacaccattagctcaagttctgaagaagtgagagcttatttccgtagggaggagctt
cttaggtattctattcctgacagggccttctcttacacagctgctgatggaaaaaagtct
atagttgctcccttgagaagatgtggaggtaagccaacttcaaaggctcgagaccatttt
atgctgaaacgtgatcggccaccgcatgttacaattctttgtcttgtgagagatgctgct
gccaggttgcccggaagtattggcacacgtgcagatgtttgtactttgataagagactct
cagtacgtcgtcgaagaagtttctgatgcacaagtaaaccagattgttagtggagcctta
gaccgcttgcactatgaacgtgatccttgtgtacagtttgatggagagaggaaattgtgg
gtttatttgcatagagaaagagaagaagaagattttgaggatgatggaacttcatctact
aagaaatggaagaggccgaaaaaggatactgctgagcaatccgatcaagtagctgtaacg
gtggcttttcatgacactggggatcagtcgggatttgaattaggctctgagcttaatgtt
gaacattcatgcattgacaatgataaaaagatggagatggagtgttgtgatagacaaaat
gcggaggataatgctgactctagtcatgagtctgagcaatgtaccactcagcaggatcat
ccaatgacattggagcctcctgacctaaatcctgtgcaagatggcgaattacaatgtcaa
gaaaattccactaatgaagatattgatgatattgatgatggtagagaaaaaccagttgaa
cacctcgatgcaagcttattatga
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