KEGG   Gossypium hirsutum (upland cotton): 107950338
Entry
107950338         CDS       T04793                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107950338
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107950338
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107950338
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107950338
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    107950338
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 DEAD ResIII zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX zf-ANAPC11 AAA_34 U-box Rad50_zn_hook Prok-RING_4
Other DBs
NCBI-GeneID: 107950338
NCBI-ProteinID: XP_016740651
UniProt: A0A1U8NNT1
LinkDB
Position
A13:complement(114452..119115)
AA seq 863 aa
MEESASSVDELWQDQESSSQSSFDTYLLGFVIANIVGLQYYRGKISGREMVGLVREPLNP
YDGNALKVLNTRTLQVGHIERSVAAVLSPLIDSHLIVVEGIVPNSRSASNRYKIPCQIHI
FARLEAFNSVKSAISRGGLELISHSDVSFTLSEAAVVKGNRAGGESQSLDKVFKLVEKNV
SKKAAMEPIEPPNEVIISRLLLHQKEGLGWLLHKENSNELPPFWEEKGGELVNVLTNYQT
DKRPEPLRGGIFADDMGLGKTLTLLSLIAFDKFGSFVPNSGDAGIEEIVQEDVKKGKRGR
GASKKGTGPRKKRNTKEAEFGSKAKGKSVSVADGCVSFSGRRTTLVVCPLSVFSSWITQI
EEHTSPGKLKVYMYYGGERTKEVEELKKYDIILTTYSTLATEESWFDSPMKKIEWWRVIL
DEAHVIKNANAQQSKAVTNLKATCRWVVTGTPIQNGSFDLFSLMAFLQFEPFSIKSYWRS
LVQRPLAQGNKNGLSRLQVLMASISLRRIKGNNLVGLPPKTLQTCYVELSVEERELYDQI
EGKAKNVIQEFIANDSLVRNYSTVLGMLLRLRQICTSLALLPLDLRAMFPSSNVEDVSNN
PELLKKMVVMLQDGEDFDCPICISPPVDVVITCCAHIFCRSCIRKTLQRMKPCCPLCRQP
LSQSDLFSAPPKSSEADHTEISSRNPTSSKVSALLSLLRESRDQKPATKSVVFSQFRTML
LLLEKPLTDAGFKILRLDGSMNAKKRAQVIKEFQVPGPDGPTVLLASLKASGAGINLTAA
SRVYLMEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERVLELQERKKKVATEA
FGRKGPKNRKEVTIDDLRTLMSL
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggaagaatcggcgtcgtccgtagatgaattatggcaggatcaagaatcctcttcccag
tcttccttcgatacttatttgcttggctttgtcatcgccaatatagtaggccttcagtat
tacagaggcaaaatcagtggccgagaaatggtgggacttgtgcgagaacctctcaaccct
tacgacggcaacgccctcaaagttcttaacactagaacccttcaagttggccatatcgag
cgttccgtagccgccgtactttcgcctttgattgactctcacttgattgtcgtcgaaggt
atcgtgcctaattctcgtagtgctagtaataggtataaaatcccctgccaaattcacatt
tttgctagattagaagcctttaattcagttaaatccgcgatttcacgaggtggattggag
ttaatttcccactctgatgtgtctttcacgttgtctgaggctgctgtggttaagggaaac
agagctggaggagagtcccagagtttggataaggttttcaagttggtcgaaaagaatgtt
agcaagaaggcagcaatggaacccatagagcctccaaatgaggttattatatctcggctt
ttgttgcaccaaaaggaaggtttaggatggttactccataaagaaaattcgaatgagttg
cctcctttttgggaggagaaaggtggagaattggtaaacgtgttgacaaattatcagact
gataaacgtcctgagcctttgcgaggagggatttttgctgatgatatgggattaggtaag
actctaactttgctttctttgattgcatttgataaatttggtagctttgttcccaattct
ggtgatgctggtatagaagagattgttcaggaggatgttaagaagggaaagaggggtaga
ggagctagtaagaaaggtactggacctcgaaaaaaacgtaatactaaggaagctgaattt
ggcagtaaagctaaggggaaatctgtcagtgtagctgatgggtgtgtcagtttttccggc
cgaagaacgacattagttgtgtgccccctctctgtgttttcatcatggattacacagatt
gaagaacacactagtccggggaaattgaaggtgtatatgtattatggaggagaaagaact
aaggaagttgaggagcttaagaagtatgatattattttgactacttatagtactctggcc
actgaagaatcttggtttgactcccctatgaagaagatagagtggtggcgagtcatctta
gatgaggcacatgtgattaagaatgcaaatgcccaacagagtaaagctgtcactaatttg
aaggccacttgtagatgggttgttacaggaactcccatccaaaatggctcatttgatttg
ttttctttgatggcatttttgcaattcgaaccattttctatcaagagctattggagaagt
ttggttcaacgaccccttgcgcagggtaataagaatggtctctcacgtctccaggttcta
atggccagcatctccttgcggagaataaagggtaataacttagttggattgccacctaaa
acattacaaacatgttatgttgagctttctgtagaagagcgtgaactttatgaccagatt
gaaggaaaagccaaaaatgttatccaggagttcattgcaaatgacagtctagtgcgcaac
tattcaaccgtgcttggcatgcttttacgacttcggcagatttgtactagtcttgccctg
ttacctctggatctccgagcgatgtttccatctagcaatgttgaagatgtatccaacaac
ccagagttgctaaaaaagatggttgtgatgctacaagatggcgaggatttcgactgtcct
atttgcatctctcctcctgttgatgtagtaattacatgttgtgcccacatcttttgccga
tcctgcatccgtaaaaccctacagcgtatgaagccatgctgccctttatgtcgtcaaccc
ttatctcagtctgatctcttttcagcccctccaaaatcttctgaagctgatcacactgaa
atatcatcaaggaaccccacatcatcgaaagtatctgctctactaagcctccttcgggag
tcaagagatcaaaagccagctacaaagtcagttgttttctctcagttccgaactatgttg
ctactacttgaaaagccgctgacagatgctggttttaagatattgcgtttagatggatca
atgaatgcaaaaaagagagctcaagtgattaaagagttccaagttccaggaccagatggg
ccgacagttttgcttgcaagtctcaaggcttcaggtgcaggtatcaaccttacagctgct
tctagagtttacttgatggaaccatggtggaacccagctgttgaggaacaggctatggat
agggttcatcgtatcgggcagaaggaagatgtaaagattgtaaggctgattgctcggaac
agcattgaagagagggtactggagttgcaagagaggaaaaagaaagtagcaacagaagct
tttggaaggaagggcccaaagaatcggaaagaagtcacgatagatgatcttcgcactctc
atgtccctgtga

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