Gossypium hirsutum (upland cotton): 107950500
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Entry
107950500 CDS
T04793
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107950500
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107950500
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
107950500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-C3HC4
PIN_12
Prok-RING_4
RPW8
DUF5663
zf-C3HC4_2
DUF4200
Herpes_UL6
Ribosomal_L22
Motif
Other DBs
NCBI-GeneID:
107950500
NCBI-ProteinID:
XP_016740838
UniProt:
A0A1U8NPS8
LinkDB
All DBs
Position
D03:3765439..3769278
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AA seq
385 aa
AA seq
DB search
MGLTMELNNLKDAFDRVAKKQKLSCSKVQEVMDQIVQEIEKAIEMMQSTTLDHKSILAEL
KKKLHEIAPLAQLEGTQKELNIALSKYPKALEKTLNPDISKAYRNIEFDSHTVNQIIASH
FYRQGMFDVGDCFITEAGEAEAAAAMRSLFQEMYQILEAMKSRNLEPALKWAATNSDKLK
ENGSDLLLGLHQLQFVKILQKGSREEALKYARTNFVPFAGNHMAEIQKLMGCLLYSDRLS
ESPYAHLLSPTNWDIVAEELTRQFCNLLGQSYQSPLSVTIAAGVQGLPPLLKFMTVMAGK
KQEWQSMKQLPVPVELDKEFQFHSIFVCPVSKEQSTEDNPPMLMSCGHVLCKQSINKMSK
NGSKTFKCPYCPSDVDAPRCRQLNF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggattgacaatggagttgaataacctgaaggatgcatttgatcgtgtagcaaagaag
caaaagctgtcctgctctaaagtgcaggaagttatggatcagatcgtacaagaaatcgag
aaggcaatagagatgatgcagtcgaccacccttgaccataaatctatacttgctgaactg
aagaaaaagttgcatgaaattgctccactcgctcagctagaaggcacacagaaggaactc
aacattgcattgagcaagtatccaaaagctcttgagaaaacccttaatcctgatatatcc
aaggcttatcgaaatatcgagtttgattctcatacagttaaccaaataattgccagccat
ttctatcggcagggcatgtttgatgttggtgattgttttataactgaagctggggaagca
gaagctgctgctgctatgagatcgctttttcaagaaatgtatcaaatacttgaagccatg
aagagtaggaacctagagcctgccctgaaatgggcagccacaaactccgataaactgaaa
gaaaatggttcagacctcctgttggggctccatcagttgcagtttgtgaaaatactacag
aagggaagcagagaagaagcactcaagtatgcaagaactaacttcgttccttttgccgga
aaccatatggccgagatccagaaactcatggggtgtctcttgtattccgatagacttagt
gagtccccatatgctcatttattatcaccaaccaattgggatatagtggctgaagagctc
actcgacagttctgcaacttactggggcagtcatatcagagcccattgagtgtgacaata
gcagcaggtgtgcaaggtctaccaccacttttaaagtttatgacagttatggctgggaag
aagcaagaatggcaatcaatgaagcagttgcccgtgccagtggagttagataaagagttc
caatttcattctatattcgtgtgtcccgtgtctaaggagcaatcgaccgaagataacccg
ccgatgctgatgtcgtgtggtcatgtgctctgcaaacaatccatcaacaagatgtcgaag
aatggatcgaaaactttcaagtgcccgtactgcccatccgatgttgatgcgccccggtgc
agacagctgaatttctga
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