Gossypium hirsutum (upland cotton): 107950566
Help
Entry
107950566 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
ghi03013
Nucleocytoplasmic transport
ghi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107950566
03008 Ribosome biogenesis in eukaryotes
107950566
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107950566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107950566
03009 Ribosome biogenesis [BR:
ghi03009
]
107950566
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107950566
03036 Chromosome and associated proteins [BR:
ghi03036
]
107950566
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107950566
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107950566
Pre-60S particles
107950566
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107950566
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107950566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
BID
Motif
Other DBs
NCBI-GeneID:
107950566
NCBI-ProteinID:
XP_016740935
UniProt:
A0A1U8NQ24
LinkDB
All DBs
Position
D03:complement(8069358..8081485)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAERLRDLSQPIDVSLLDATVAAFYGTGSKQERAHADQILRDLQNNPDMWLQVVHILQQ
TKSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNK
LNIILVQILKHDWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESTLLET
LLKFFPVPSYRNLTLQCLTEVAALNFGDYYNVQYVKMYNIFVVQLQTILPPTTDIPEAYA
HGTSEEQAFIQNLALFFTSFYKFHIRVLETAQENISALLVGLEYLINISYVDDTEVFKVC
LDYWNSLVLELFDANHNMDNSAVTANMMGLQVPLLPGLVDGLGAQLLQRRQLYAGTMSKL
RMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGENEPFVSELLSALATTVADLEPHQIHSFYESVGHMIQAESDPHKRDEYLQR
LMELPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTHFLSQISLIFLD
MLNVYRMYSELISSSIAEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKVAMIDDVPRLFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFAALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLSIEQEIFAVLTDTFHKPGFKLHVLXLQHLFCLVESGL
LTEPLWDAATVPYPYPNNGMFVREYTIKLLSTSFPNMTAAEVTQFVNGLFDSRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAALQRERERQRMLSIPGLIAPNEIQDEMLDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagaggcttagggatttgagtcagccgattgatgtttccttgcttgacgcc
accgttgctgccttttacggcaccggatctaaacaagagagagcacatgctgatcagatc
ttgcgagatctgcaaaataatccggatatgtggcttcaagttgtgcacatcttgcagcag
acaaagagccttaataccaagttttttgccttgcaggttcttgaaggtgtcatcaagtat
agatggaatgccttgcctgttgagcagcgagatggaatgaaaaattacatttctgaagtc
attgtacagttgtcaagcaatgaggcatcctttcgagcagaaaggctgtatgtcaacaag
ctgaatatcatattggttcagattctaaaacatgattggccagctagatggcgaagcttc
attcctgatcttgttgcagcagcaaaaactagtgaaacaatatgcgaaaattgcatggca
atactgaaacttctaagcgaagaagtttttgatttctcaaggggtgaaatgactcaacaa
aagatcaaagagcttaaacaatctctaaatagtgagtttcaactcattcatgagttatgc
ttatacgtattatcagcttcgcaaagaacagagcttatacgggctaccctgtccacctta
catgcatttctttcgtggattcctctgggctatatatttgaatcaactttgctggaaaca
ctcctaaaatttttccctgtaccatcataccggaatcttaccctccaatgcctaacagag
gttgctgccttaaatttcggggactactataacgtgcaatatgttaagatgtacaatatt
tttgtggtccagttgcagactattctcccacccactacagacatccctgaggcttatgca
catggaaccagtgaggaacaggcattcattcagaatttggcactattcttcacttcattc
tacaagtttcacattcgggtgctagagactgcgcaagaaaatatttctgcattgttagtg
ggtctggaataccttatcaacatatcttatgtggatgatacagaggtctttaaggtttgc
ttggactattggaactccttggtcttggagctgtttgatgcaaatcataacatggataat
tctgctgtaactgcaaacatgatgggactgcaggtgcctttgcttcctggcctggtcgat
ggccttggtgcccagcttctgcaacgaaggcaactttatgctggtacaatgtcaaagctg
agaatgctcatgatttgccgtatggctaagcctgaggaggttttgatagttgaggatgag
aatggcaatattgttcgagagacgatgaaagataatgatgttcttgttcagtataagatt
atgagggagacattgatctatttgtctcacttagatcatgaggatactgaaaagcagatg
ctaaagaaattaagtaagcaattgagtggtgaggattggacttggaacaacttgaacaca
ttatgttgggcaataggatctatttctggttccatgatggaagaacaggaaaacaggttt
ctggtgatggtcattcgtgatttgctgaatttgtgtgaaatcactaaagggaaagacaat
aaagctgttattgctagtaacattatgtatgtggttggacaatatccaaggtttttaagg
gcgcactggaagttccttaaaactgttgttaataagttgttcgaattcatgcatgaaaca
catccaggagttcaggatatggcctgtgatacattcttgaagattgttcagaaatgcaag
cgaaaatttgtgattgtgcaggttggagaaaatgaaccatttgtatctgaacttctatct
gctcttgcaaccaccgttgctgatctagagcctcatcagattcattcattttatgaatca
gttggtcatatgattcaagcagaatctgatccccataagagggatgaatacttgcagaga
ctgatggaactccccaatcagaaatggggtgaaattattgggcaggcacgtcaaagtgtt
gacttccttaaagaccaggatgtgataagaactgtgttgaacatattgcagacaaatact
agtgttgccagttctcttggaacgcacttcttatctcagatttctttgatcttcctagac
atgctcaatgtatacagaatgtacagcgagcttatatcaagtagtattgcagaaggtgga
ccctatgcatcaaaaacatcctatgtgaaacttctacgatctgtgaagagggagactcta
aagctcattgaaacatttttggacaaggcagaagatcaaccacaaattgggaaacaattt
gtgcccccaatgatggatccagttcttggtgactatgctaggaatttgcctgatgctaga
gaatctgaagttctttcactttttgccacaataataaacaagtataaagttgcaatgata
gatgatgttccccgtctatttgaagctgtttttcagtgcacactggagatgataaccaaa
aattttgaagattacccagaacatcgcctcaaattcttttcactgcttcgtgccattgct
actcattgttttgctgcacttatacggttatcaagtcagcaattaaagcttgttatggat
tcaatcatttgggcattccggcatacagagaggaatattgcagaaactggtctaaatctt
ctattggagatgctgaaaaactttcaggcttctgaattttgcaaccagttctaccgaaca
tactttttgtcaattgagcaagaaatatttgccgtcttgacagacacatttcacaaacct
ggtttcaagttgcatgtcttgngtttgcagcacctgttctgcctggttgagagtggtttg
ttgactgagccattgtgggatgctgctacggttccatatccatacccaaacaatggaatg
tttgttcgtgaatacacgataaagcttctgagtacatcattccccaacatgactgctgct
gaggttactcaatttgtgaatggattatttgactcgagaaatgatttgtccacttttaaa
aatcacatacgggacttccttgtgcaatcaaaagaattttcagctcaggacaataaagat
ctctatgcagaagaggctgccctacaaagggaaagagagcgacaacggatgctttctatc
ccagggctcattgccccaaatgagatacaagatgagatgttagactcgtag
DBGET
integrated database retrieval system
