Gossypium hirsutum (upland cotton): 107950580
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Entry
107950580 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107950580
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Motif
Pfam:
GH3
GH3_C
GH3_M
YfjL_C
Motif
Other DBs
NCBI-GeneID:
107950580
NCBI-ProteinID:
XP_016740947
UniProt:
A0A1U8NPM6
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Position
D03:complement(7602468..7605741)
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AA seq
580 aa
AA seq
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MATNEYEGGLKMIEELTTNAEQIQDEVLREILSRNAGTEYLRGFLHGQTDKQLFKKNVPI
VTYEDLKPYIDRIVNGETSDILLAEPTTGFFLSSGTSGGQPKLMPVTAQVAKKWELFRGL
YESPVIKYLVDINQAGKRMELMFARPEVETPSGLMATSVTTSIFKGSGFRASLPKLYTSP
SETIFCPDPNQSLYCQLLFGLIQREEVVMIGSFFASTVLRAIKFLENHWQELRYDIKTGR
LSHQITDSRCRNAASLVMKPNPEQADLIENICNCKSWDGIIRKLWPKARYIAGICTGVMR
QYTAELEFYSGGLPLVSSLYASSEAFCGINIEPLCKPSDVSYTFLPNMAYFEFLPVKNER
DESIEMKSNDEDTELVDLVNVKPGRCYELVVTNSTGLYRYKVGDVLMVSGFHNNAPQFQF
VERKSVVLSVDMEKTSETDLFKAVTEAKALLNPLGFILTEYTSYADTSSVPGHYVLFWEL
KEKEGEHCKELDPKIMVECCFKIEESLHYTYKIYRKRNIIAALEIRVVKQGSFEALMDYC
VSKGTSLSQYKKPSCIKSEEALNILDSRVTGKYFSPKSPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgagtatgaaggtgggttgaagatgattgaggaactgaccacaaacgct
gagcaaattcaggacgaggtgttgagggaaatactaagtagaaatgcaggaacagagtat
ttaaggggattcctccatggtcaaaccgacaagcagctctttaagaaaaatgttcccata
gttacttatgaagatctcaagccttacatagataggattgttaatggggagacatcagat
atccttttagctgaacccactacagggttctttctaagctctgggacttcaggcgggcag
ccaaagctgatgcctgtcaccgctcaagttgctaagaagtgggaattatttcgtggcttg
tacgagtctcctgtgataaagtaccttgttgatatcaaccaagccggtaaaagaatggag
cttatgtttgccagaccagaggttgaaactcctagtggcctcatggcaacatctgttaca
accagcatattcaagggcagtggatttagagccagtttacctaagctttacacaagcccc
agtgagaccatcttttgcccagaccccaaccagagcttatactgtcaattactttttggt
ttaatccaacgagaagaggttgtcatgattggttcattctttgcatctactgtgctaaga
gctatcaagtttctagaaaatcattggcaagagctacgctatgacataaaaacgggtcga
ttaagccatcagattacagactctagatgcagaaatgcagcatcattggtcatgaagcct
aatccagaacaggctgacttgatagagaacatatgtaattgtaaatcatgggatggaata
atcagaaagctatggcctaaagcaaggtacattgctggcatctgtacgggtgttatgaga
cagtatactgcagagctcgagttctattccggagggcttcctttagtttcatctttatat
gcttcctcagaagctttttgtgggattaacatagaacctctatgcaaaccttctgatgtc
tcctacacatttctccctaacatggcttacttcgaattccttcctgtgaagaatgaacgt
gatgaatctattgaaatgaagagtaacgatgaagatacagaacttgttgatcttgtaaat
gtgaagcctggtcgatgttatgaactagttgtcacaaattctacaggattatatcgatat
aaagtcggagatgttcttatggtgagtggtttccacaataatgcacctcaattccagttt
gtggagaggaaaagtgttgtcctaagtgttgatatggaaaaaactagcgaaactgacctt
ttcaaggctgtgacagaagcaaaggctcttctcaatccactcgggttcatcttaacagag
tacactagctatgctgatacttcttccgtaccaggtcactatgtcttattctgggagctc
aaggaaaaagaaggcgagcattgcaaagagcttgacccaaaaataatggtagaatgttgc
tttaaaatagaagagtcattgcattatacatataaaatctataggaaaaggaacataatt
gcagctttggagattagggtggtaaagcagggaagttttgaggcactaatggattactgt
gtgtccaaaggaacttcattgagccaatacaaaaaacctagttgcattaaatccgaggaa
gccttgaatatattagattcaagagtgacaggaaagtatttcagcccgaaatcaccgtta
taa
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