Gossypium hirsutum (upland cotton): 107950655
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Entry
107950655 CDS
T04793
Name
(RefSeq) protein PAF1 homolog isoform X1
KO
K15174
RNA polymerase II-associated factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107950655
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107950655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Tudor_5
Motif
Other DBs
NCBI-GeneID:
107950655
NCBI-ProteinID:
XP_016741025
UniProt:
A0A1U8NQA9
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Position
D03:complement(11409864..11415506)
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AA seq
672 aa
AA seq
DB search
MASYRSFPPQSFPPPPSPNQNPLPPQQHYDQNYNQMNLKSNYHYPSSRPPQQQQQPPPPP
PPQQQYSYPPPPPPPLDSSYPPPPPPPLPTVPQNTFNSQPPIYYPPSQYSSQYGNQAMQP
PPPPPPPSSPGSSIPPPPPPSSPPPPPPPKESAGDKRLSELSKVGNRDFSGSGRREHGHS
NHRIGGREHKPMVPPVKNPNVHTGRVETEEERRLRKKRDFEKQRQEEKHRQQKKESQKAQ
LMSSSKAHGSMIGSRMGDRRGTPFLSGERIENRLKKPTTFLCKLKFRNELPDPCAQPKLM
ALKKDKDRFTKYTITSLEKMYKPKLIVEPDLGIPLDLLDLSVYNPSSVRPPLAPEDEELL
RDDVAITPIKKDGIRRKERPTDKGVSWLVKTQYISPLSMESTKQSLTEKQAKELRELKGG
RNLLENLNNRERQIKEIEASFEASKLRPVHATNKNLEPVEVMPLLPDFDRHNDQFVMVAF
DGAPTADSEIFSKLHGSVRDEHESRAIMKSYVAPSSDPANPEKFLAYMVPSLDELSKDMY
DELEDISYSWVREYHWDVRGDGANDPTTYLVSFDEGDARYVPLPTKLNLRKKRAREGRSG
DEIEHFPIPSRITVRRRSTAAAIELKEPEVYSNTRDSNSRRLDAEDGVGRPRKLARHQDV
GQYSGDEDDFSD
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtataggtcattcccaccacaatcctttcctcctccaccctcaccaaatcaa
aatcctctcccaccccaacaacattatgatcaaaattacaatcaaatgaatttgaaatca
aattatcattacccttcttcaagaccgccccaacaacagcagcagccaccgcctcctcca
cctccacagcagcaatattcttatcccccaccgcctccgccacctctggattcttcctat
ccacctcccccaccccctcctctgccaacagtgccgcaaaataccttcaactcacagcca
ccaatatactatccaccttcacagtactcatcacagtatggcaatcaagcaatgcagcca
cctcctccaccgcctcccccaagttctcccggttcttcaatccctccacctcctcctccc
agttctcctccacctccgcctcctccaaaggagagtgctggggacaagaggttaagtgag
ctcagtaaagtggggaatagggatttttcaggttctggaaggcgtgaacatgggcattcc
aatcacaggattggtggtagagagcacaagccaatggtgccccctgtaaagaacccaaat
gtacatacaggaagagtggagacagaggaagagaggaggttgaggaagaagagggacttt
gagaagcaaagacaagaggagaagcatagacagcagaagaaggagtcgcagaaggcccaa
ttaatgtcttccagcaaagcgcatggttcaatgataggctcacggatgggagataggaga
ggtacaccatttttgagtggtgagaggattgagaatagattaaagaagccaactacgttc
ttgtgcaagttgaaattccgaaatgaacttcctgatccatgtgcacagcccaaacttatg
gccttgaagaaagataaagatcggtttacaaaatacaccatcacctctctagagaaaatg
tacaagcctaaacttattgttgagccagatctcgggataccactggatttgcttgacctc
agtgtgtacaatccttctagtgttagaccaccacttgccccagaagacgaggaactcttg
cgtgatgatgtagctataacccctataaagaaagatggcataagacgaaaagaaagaccc
actgataaaggtgtttcttggcttgttaaaacacagtacatttctccacttagtatggaa
tcaacgaaacagtctttgactgaaaagcaagcaaaagaactgcgagaacttaagggaggc
cgtaatcttttggagaaccttaacaatagggaaagacaaataaaagaaattgaggcatca
ttcgaggcatccaagttacgtcctgtccatgcaaccaataaaaacttagagcccgttgaa
gttatgcctctcttacctgattttgataggcacaatgatcagtttgttatggtggcattt
gatggtgctcctacagctgactcggagatattcagcaagcttcatggctctgttcgtgat
gaacatgaatcaagggccattatgaaaagttatgtggcaccaagctcggatccagctaat
cctgagaaatttttggcatacatggtgccttcccttgatgagctgtcgaaggatatgtat
gacgagctcgaagatatctcatattcttgggttcgtgaataccactgggatgtgcggggt
gatggcgcaaatgacccaacaacatacctggtttcattcgatgaaggagatgcccgctat
gtgcctcttccaacaaagcttaatttaagaaaaaagagggccagagagggaagatctggt
gatgagattgaacattttcctataccttccagaattactgtaaggaggagatcaacagct
gctgcaatagaactgaaagagccggaggtttattccaacacaagggacagtaattcgaga
aggttggatgcggaagatggcgtgggaagaccacggaagcttgcacgacatcaagatgtg
ggtcagtatagtggggatgaagatgacttctctgattga
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