Gossypium hirsutum (upland cotton): 107950683
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Entry
107950683 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107950683
03012 Translation factors [BR:
ghi03012
]
107950683
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107950683
mRNA cycle factors
Stress granule specific factors
107950683
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-4
107950683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
COMMD9_HN
Motif
Other DBs
NCBI-GeneID:
107950683
NCBI-ProteinID:
XP_016741066
UniProt:
A0A1U8NQ06
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Position
D03:complement(23120808..23126877)
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AA seq
784 aa
AA seq
DB search
MQQGDQMVLSLRPGGGRGSRLFGAPSSSSSSSSLAFGSLSSDLPVFRPHAGAPPAFSIKA
GDSRFEGRERVQYTRDQLLKLREAVEVSDEILKIKREIEVELFGEDQNRTHGESNPPNQS
QNRYSEPDNRDWRNRSAQFSSDGEERSWESLHDRELGNHYDSKQPEASQFNRQAQISFNQ
LNCSFWMVGQGGQTPALVKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKYDLLKGQL
IDSGITSADILKGVISLIFEKAVLEPTFCPMYALLCSDLNDKLPSFPSDEPGEKEITFKR
VLLNNCQEAFEGADKLREEVAQMTAPELEMERREKERLVKHRTLGNIRLIGELLKQKMVP
EKIVHHIVQELLGHDTKGCPVEENVEAICQFFNTIGKQLDESLKSRRINDAYFNRLKELV
TNPQLASRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEXNLGLRPGATASIRNS
RIVSVGPMSPGGFPITRPGTGGLMPGMPGTRRMPGMPGMENDNWEVPRTRSMPRGDGLGM
LPGGRVPSPSINKPTSVNPRLLPQGSGGLMSGRTSALLQGSSSPPVAQPSLPAKPVLVAA
VSPVLEKPVTPASRLNQDELSRKTKALLEEYFSVRLLDEALQCVEELKSPGYYPEVVKEA
ISIALEKIPPCVEPVSKLIEYLFIKKVLTARDIGTGCLLYGALLDDIGIDLPKAPNNFGE
IIGKLALPGGLDFNVVREILKKMEDDLYQKAVFDAAMRIVSSSPSGQAVLEAQASEVKVC
QSLF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagggtgatcagatggtgttaagcttaagacctggtggtggtcgagggagcaga
ctctttggtgctccctcttcttcatcctcctcctcttcgttagcctttggttccctttct
tctgatcttcccgtctttcgtccccatgctggtgctcctcccgccttttctatcaaggct
ggagactcacgatttgagggccgtgaacgtgtgcagtacactagggaccagcttctaaag
cttagggaggctgtagaagtttccgacgagattcttaaaatcaaacgagaaattgaagtg
gaactttttggtgaagatcagaaccggactcatggagaaagtaacccaccaaatcaaagt
cagaaccgttactctgagcctgacaatcgtgattggcgtaaccgttcagcacagttttca
tctgacggagaggagaggtcctgggaatcacttcatgatagagaattggggaaccattat
gactccaagcaaccagaagctagtcaattcaatcgtcaagcacaaatctcctttaaccaa
ctgaattgttctttttggatggtggggcaggggggacaaactccagctttggtgaaggct
gaggtgccatggtctgctagaaggggcaacttatctgaaaaggatcgtgttctaaagact
gttaaagggatattgaacaagctgactcctgagaagtatgatcttctgaagggccaactt
attgattctggtattacatcagctgacatcttgaagggggttatttctctaatatttgag
aaggctgttttggaacccacattttgtcctatgtatgctcttttatgttctgatctcaat
gataagctcccttcattcccatccgatgaacctggtgaaaaagaaattacatttaagcga
gtcctcttgaataactgtcaggaggcatttgagggagctgacaagcttagggaagaagtg
gcgcagatgactgcccctgagctagagatggagcgtagggaaaaagaaaggttggtcaaa
catcgtactctaggtaacattcgtttaattggtgagcttctgaagcaaaaaatggtacct
gagaagatagtccatcacatcgtgcaggaacttttgggccatgatactaaaggctgccct
gtggaggagaatgttgaagcaatttgtcagttcttcaatactattggtaagcagcttgat
gagagcctgaaatcacgacgcataaatgatgcatatttcaatagactgaaggaattggtc
acaaatcctcagcttgcttcaagactgagatttatggttcgtgatgttcttgatctgcgt
gctaacaattgggttccaaggcgtgaagaggtgaaagccaaaacaattactgaaatccat
tctgaagctgaanaaaatcttgggctgcgtcccggtgctactgcaagtattagaaatagt
cgtattgtttctgttggtccaatgagtcctgggggttttcccataactcgtcctggtact
gggggtttgatgcctggaatgccgggaactcggagaatgcctggtatgcctggaatggaa
aatgataactgggaggttcctagaacacgatcaatgccaaggggtgatggactgggtatg
ctacctggagggcgtgttccttcaccttcaatcaataaaccaacttcagtgaatccaagg
ttgttgcctcaaggtagtggtggcctaatgagtggtaggacaagtgccctgttgcaggga
agctcatcccctcctgtggcacaaccttctcttcctgccaaacctgttctggtggctgct
gtgtctccagttttggagaaaccagttacaccagcttcaagactgaatcaagatgaactt
agtagaaaaacaaaggcactgttggaggaatatttcagtgttaggctgctggatgaagca
ttgcagtgtgtggaggaactaaaatctccggggtactatcccgaggttgtgaaagaagcg
atctccattgccttggagaaaatcccaccttgtgtcgagccagtttcaaagcttatagaa
tacttgtttattaagaaagttcttacagctagagacatagggacggggtgtctgctctat
ggtgccttgttggatgatattggcattgatttaccaaaagcaccaaataatttcggagaa
ataattgggaaacttgcattgcctgggggattagattttaatgtggttagggaaatcctt
aagaagatggaagacgacctgtaccaaaaagctgtatttgatgcagcaatgaggattgtt
agctcaagtccttcggggcaagctgtgttggaggcacaggcatctgaggtcaaggtttgt
cagagtctattctaa
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