Gossypium hirsutum (upland cotton): 107950689
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Entry
107950689 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107950689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107950689
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107950689
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
107950689
NCBI-ProteinID:
XP_016741073
UniProt:
A0A1U8NSM0
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Position
D03:23621545..23630135
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AA seq
568 aa
AA seq
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MVLVSAVRDYVYRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELIDSISKS
KESMSHLKAVYFLRPTSENIQYMRRQLSNPRFGECHLFFSNMLKDTQIHLLADSDEQEVV
QQVQEFYADFISVDPYHFTLNMPSNHYYILPAVVDPSNLQHFCDRAVDGIGAVFLALKRR
PIIRYSRASDIAKRIAHETAKLMYQQESGLFDFRRMEMSPLLLIVDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRSIGKFPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMV
DDFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERKLMLVSE
TEQDLACNGGQVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKPGLVQFLLKQAGADKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLFQT
MESIIKGRLRDVDYPYVGNHFQQGRPQEVVIFIIGGTTYEESRSVAQLNASNSGIRFIIG
GTAVLNSKRFLKDLEEAQGIARSNANVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtgtcggccgtacgggattatgtttaccggatgttacaagacatctccggc
atgaaagtcctcattcttgattctcaaacggttagcattgtgagtgttgtttattcccaa
tcagagctacttcagaaagaagtctttttggtagaattgatagactccatctccaagtca
aaagaatctatgtcgcatctcaaggcagtttatttccttcggcctacatcagaaaatatt
caatatatgcggcgtcagctatctaaccctaggtttggagagtgtcacttgtttttctca
aacatgttgaaggatactcagattcatcttttagctgattcagatgaacaagaagttgtc
cagcaagtccaggagttttatgcagacttcatttcagttgatccttatcacttcacttta
aacatgccctcaaatcattattatattctcccagcagttgtggacccttctaatttgcag
catttctgtgaccgagctgttgatggtattggtgcagttttcttggcattaaaacggaga
ccaattattagatattcaagggcatctgatattgcaaaaaggattgctcatgaaacagca
aagttaatgtaccagcaagaaagtggtctttttgacttcaggcggatggaaatgtctccg
ttgctgctgatagttgacagaagggatgatcctgtgactccattgctgaaccaatggacc
tatcaggcaatggttcatgaattgataggtattcaggataacaaagtggatttgagaagc
attggcaaatttcccaaagatcaacaggaagttgtgctttcatcagaacaagatgctttc
ttcaaagctaacatgtatgaaaactttggagatatcggaatgaatatcaagcggatggtg
gatgattttcagcaagttgctaaaagcaaccaaaatatacagactatagaagacatggcc
aaatttgtagacaattacccggagtacagaaaaatgcatgggaatgtttcaaagcatgtc
acattggtaacagaaatgagcaagatagttgaggagagaaaacttatgttggtttcagaa
actgagcaggatttggcttgcaatggggggcaagttgctgcttttgaggcagtgacaaat
cttttaaataatgaaagtgtatctgatattgaccgacttcgcctggtaatgctgtatgct
ttgcgctacgagaaggagagtcctgtccagttaatgcagctatttaacaaactggcatct
cggtctgccaaatacaagccagggcttgtgcagtttcttctaaagcaagcaggggctgat
aagcgtactggtgatctttatggaaatcgtgattttctaaatattgctcgcaacatggct
cgtggactgaagggggttgagaacgtgtacacccagcaccagcctcttcttttccaaact
atggaaagcataatcaaaggacgactgagagatgtggactacccatatgttggaaatcat
tttcagcagggcaggccacaggaggtggttatattcatcattggtggaacaacttatgag
gaatcgcgctctgttgctcagctaaatgccagcaattctggaattcgttttataattggt
ggaacagcagttctcaattctaagaggtttctgaaggacttagaagaagctcaggggata
gctcgaagcaatgccaatgttgtttaa
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