KEGG   Gossypium hirsutum (upland cotton): 107950735
Entry
107950735         CDS       T04793                                 
Name
(RefSeq) protein transport protein SEC31 homolog B
  KO
K14005  protein transport protein SEC31
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107950735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107950735
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ghi02044]
    107950735
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107950735
Secretion system [BR:ghi02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   107950735
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40 Beta-prop_RIG_2nd WDR55 TPR_Sec16 TPR_GEMI5 Beta-prop_EIPR1 MIOS_WD40 EIF3I Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st SRA1 Beta-prop_SCAP Prp18
Other DBs
NCBI-GeneID: 107950735
NCBI-ProteinID: XP_016741158
UniProt: A0A1U8NSW0
LinkDB
Position
A08:8519634..8528492
AA seq 1109 aa
MACIKGVNRSAQVAMAPDAPYMAAGTMAGAVDMSFSSSANLEIFKFDFLSDDRELPLVGE
CPSSERFNRLAWGKNGSGSDEFSLGLIAGGLVDGNIDLWNPSNLIRSMSSEQAIVGRLSR
HKGPVRGLEFNAIASNLLASGADDGEICIWDLSAPAQPSHFPPLKGSGSAAQGEISYLSW
NSKVQHILASTSHNGTTVVWDLKKQKPVISFADSVRRRCSVLQWHPDVATQLVVASDEDG
SPMLRLWDMRNIMSPVKEFVGHTKGVIAMAWCPTDSSYLLTCAKDNRTICWDTVTGEIVC
ELPAGTNWNFDVHWYTKIPGVISASSFDGKIGIYNIEGCSRYGVGEGNFGAVSLRAPKWY
KRPVGVSFGFGGKVVSFRPQIHGVGTSPSSEVFVHNLVAEESLVSRSSEFESAIQNGERS
SLRVLCEKKSQESESQHDRETWGFLKVMFEDDGTARTKLLMHLGFSPPAEEKDTVQNDLS
QSVTDITLEEKVSYEKEATLFAADNGEDFFNNLPSPNADTPVATSENNFHVEGTVPSTDL
TPQESDGLEGSAYPSFDDAVLRALVVGDYKGAVAQCIAANKMADALVIAHVGGTSLWEST
CDQYLKMSHSPHLKVVSAMVNNDLMSLVNRRPLKLWKETLALLCTFAQREEWTVLCDTLA
SKLMASGNTLAATLCYICAGNIDKTVEIWSRCLTTEHDGKSYVDLLQDLMEKTIVLALAT
GQKQYSASLCKLVEKYAEILASQGLLITAMEYLKLLGSDELSPELVILKDRIALSTEPEK
ETTSMAFENSHLASGSVFEPMQQIYPESATSQIQPSVPISAYDENYQRSFCQYGGYAPPP
SYRPQPPAPANTFVPTQSPHVSQGNFAPSPGTTQPVVRPFVPSNPPGLRNADQYQQPPAL
GSQLYPGAANPTYPVPQGTGSPAPVPSQMGSVPGPKVPQFIAPTPTPRGFMPVTDTPVVQ
RPGMSPVQSTSLTQSASIQPAAAPAAPPPTVQTADTSNVPAHQKPVITTLTRLFNETSQA
VGGPRANPAKKREIEDNSKKIGALFAKLNSGDISKNASDKLIQLCQALDNNDFGTALHIQ
VLLTTNEWDECNFWLATLKRMIKTRQNVR
NT seq 3330 nt   +upstreamnt  +downstreamnt
atggcgtgtataaaaggggtgaacagatcggcgcaagtggcaatggcgccggacgctccc
tacatggcagcggggacaatggctggggcggtggatatgtcctttagctcatccgcgaat
ctcgagatattcaagtttgatttcctgagtgatgatcgcgagcttcctttggtaggcgag
tgccccagctcagagcgatttaaccgcctcgcttggggcaagaacggatctggttccgat
gaattttcactcgggctcattgctggtggactcgttgatggcaatatcgatctttggaac
ccctcaaacctgatacgctctatgtcaagtgaacaagctattgttggacgtctttctaga
cacaaaggacctgttcgtggtctcgagttcaatgccattgcttcaaacttactagcatct
ggggctgatgatggtgaaatctgcatctgggatttgtcagcacctgcacaaccgtctcat
tttccgcctcttaagggtagtggttctgctgctcaaggtgaaatctcatatctgtcctgg
aacagtaaggtccaacatatactggcctcaacttctcataatgggacaactgttgtttgg
gacttgaagaagcaaaaaccagtgataagttttgcagattcagttagaaggcggtgttct
gttttgcagtggcatcctgatgttgccacccaacttgttgttgcctcagatgaagatggt
tcacccatgttaaggctttgggatatgcggaacataatgtcaccggtgaaggagtttgta
gggcacacaaaaggtgtaattgcaatggcatggtgtcccactgacagctcttatttgctc
acatgtgccaaagataatcgaactatttgttgggatactgtgactggagagattgtctgt
gaattgcctgccggtaccaactggaactttgatgtgcactggtatacaaagattcctgga
gtaatatcagcatcttcctttgatggcaagattggcatttacaatattgagggttgcagc
cgatatggtgttggggagggtaattttggtgcagtgtctttgagagcaccaaaatggtat
aaacgtcctgttggggtatcttttggatttggaggaaaagttgtctcatttcgccctcag
attcatggtgtaggtacttctccgtcatcagaggtttttgtgcacaacttagttgctgaa
gaaagtctggtcagtcgttcatctgaatttgaatctgcgatccaaaatggggagaggtct
tctctaagggttctatgtgaaaagaaatctcaagagtctgaatctcagcatgatagagaa
acgtggggcttcttaaaggtgatgtttgaagatgatgggacagctaggacaaagttgctc
atgcatcttggttttagcccacctgcagaagaaaaagatactgtacaaaatgacctctct
cagagtgtgactgatattacccttgaggaaaaagtgagctatgagaaagaagctaccctc
tttgctgctgataatggggaggatttcttcaacaatcttccaagtcccaacgctgataca
ccagttgcaacttctgaaaataactttcatgttgagggcacagttcctagcacggatcta
acacctcaagaatcagatgggctggagggaagtgcatatccatcatttgatgatgctgtt
ctacgtgctttggtggtgggtgactataagggagcagttgcacaatgcattgcagccaat
aagatggctgatgcattagttattgctcatgttggtggtacttccttatgggagagcaca
tgtgatcagtatcttaagatgagccattcaccacacctgaaggttgtctctgcaatggtg
aacaatgatctcatgagtcttgtcaatagaaggcctttgaaactatggaaagaaacactt
gcactcctctgtacatttgcccaaagagaggaatggacagtactctgtgatacgcttgct
tccaaactaatggcttctggtaatactctggcagcaactctctgttatatatgtgcggga
aatattgataaaacagtagagatttggtcaaggtgcctgacaaccgaacatgatgggaaa
tcttatgttgatcttctccaggatttgatggaaaagactattgtccttgctttggcaact
ggccagaagcaatatagtgcatctctctgcaagcttgttgagaaatatgctgaaatattg
gctagtcaagggcttctaattacagccatggagtacttgaagcttttggggtctgatgag
ctgtcacctgaacttgttatcttaaaagatcgtattgcactttcaacagaacctgagaaa
gaaactacatctatggccttcgaaaactctcatctagcaagtggatcagtctttgaacct
atgcaacagatatatccggagtctgctacttcacaaattcagccaagtgttcctattagt
gcttacgatgaaaattatcagcgttctttctgccaatacggaggatatgcacctcctccc
tcgtatcgacctcaaccaccagcacctgcaaatacttttgtgccaacgcagtctcctcat
gtttcccagggaaatttcgctccttcacctggcaccactcagcctgttgttagacccttt
gttccttcaaaccctcctggtctaagaaatgcagatcaatatcagcagccacctgccttg
ggttctcaattatatcctggtgctgctaaccctacttatcctgttccccaaggaactggt
tctcctgcacctgtcccatcgcaaatgggatcagttcctggccccaaagtgccccaattt
atagctcctactccaacacctagagggtttatgccagtgaccgacacacctgttgttcaa
agacctggcatgagtcctgtgcaatctactagccttacgcagtcagcatcaatacaacca
gctgcagcacctgctgcacccccaccaactgtgcagactgctgacacttcaaatgtacct
gcccaccagaaacctgtaatcacaactttaactagacttttcaatgagacctctcaagca
gtgggaggaccacgtgcgaacccagccaagaagcgtgaaatagaagacaattcaaagaaa
ataggtgccttatttgccaaactcaacagtggagacatttcaaaaaatgcttctgataag
cttattcagctctgccaggcgttggacaataatgattttgggacagctctacatatccag
gttcttcttactaccaatgagtgggatgaatgcaacttttggcttgcaactctgaaacgg
atgattaagacaaggcagaatgtaagataa

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