Gossypium hirsutum (upland cotton): 107950809
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Entry
107950809 CDS
T04793
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107950809
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107950809
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-GeneID:
107950809
NCBI-ProteinID:
XP_016741251
UniProt:
A0A1U8NQI8
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Position
D03:13658402..13660041
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AA seq
270 aa
AA seq
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MIIVVHFLLIKQNLRFDFLTNAMIQDITTKDRKQFHVNVLGYKNITFEHFTVSAPDESPN
TDGIHIGRSDGVNVLNSEIKTGDDCVSIGDGSKNLVSNGVTCGPGHGTSIGSLELFKNEE
PVDGVTVKNCTFTNTSNGVRIKTWPGAEPGTCSNIHFEDITATNVSSPIIIDQKYCPRNK
CKINEESKVKLRNISFKNIHGTSALPEAVKIIYSATLPCENVELADIEITHSGPTGPVVS
QCSNVKPKVSGKQNPAPCSAPIPAKPTSAA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtggttcacttcctattaattaaacagaacctaaggtttgattttttaacc
aacgcaatgatacaagatataactaccaaagacagaaagcagttccacgttaatgttcta
ggatacaaaaacattactttcgaacatttcactgtatctgcacctgatgaaagcccaaac
acagatgggattcacatcgggagatcagatggggtaaatgttcttaactcggagataaaa
actggtgatgattgtgtttcaattggggatggttccaaaaatttggttagcaatggagta
acttgtggaccaggacatggtaccagtattggcagtctcgaattgtttaaaaatgaagaa
cccgttgatggagttacagtaaaaaactgcaccttcactaacacttccaatggtgttaga
atcaaaacttggccaggtgctgaacccggcacttgttcgaacattcactttgaggatatt
accgcgaccaatgtcagttctcctattataattgatcagaaatattgcccacggaacaaa
tgcaaaataaatgaagaatcaaaagttaaactaagaaacattagtttcaaaaacattcac
ggcacttctgcgcttccagaagctgtcaagattatttacagcgctactttaccgtgtgaa
aatgtggaacttgccgacattgaaattacacacagtggaccgactggacctgtagtatca
caatgctcgaatgtgaagcctaaagttagtggcaaacaaaatccagctccatgttccgcc
cctatcccagcaaaacctacctcggctgcttaa
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