Gossypium hirsutum (upland cotton): 107950860
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Entry
107950860 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 1 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107950860
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107950860
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107950860
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GFIT
Motif
Pfam:
Rhomboid
CcmH
Motif
Other DBs
NCBI-GeneID:
107950860
NCBI-ProteinID:
XP_040946220
UniProt:
A0ABM2ZVE4
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Position
D03:46817756..46821226
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AA seq
416 aa
AA seq
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MDSKIEIKVTNPKNGDKVVHSVRPGHATSPSPSSQPSQSSDGRRRRQGQGYGHGEGEGQR
NRGREGQHAGRLIDFMPFKKWVPWMIPGFVLVNIFLFMITMYINNCPKNSKKCVGSFLGR
FSFQPFKENPLLGPSSSTLEKMGALEVSKVVKSRQAWRMISCIWLHAGVFHILANMLSLL
FIGIRLEQEFGFVRIGMLYLIAGFGGSILSSLFIQTGISVGASGALFGFLGSMLSELITN
WTIYSNKFAALLTLVLVIVINLAMGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGYVSQ
KKVPPGYIAPSRKPKHKTYQYVLWVCSLILLIAGFAIGLVLLLRGVNLNEHCSWCHYMSC
IPTPLWSCKNRQVYCQSTEFGKSLNLTCISNGKSEIYPLTEENTSQVQQLCSKLCG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattccaagattgaaatcaaggtgaccaatccaaagaacggagataaggtagtgcat
tcggtgagaccaggtcatgccacgtcaccgtcaccatcgtcacagccatctcagtcgtct
gacgggcggcgtaggcggcagggacaagggtacgggcatggagagggagaggggcaaagg
aacaggggcagggaagggcagcatgcagggcggttgattgatttcatgccgtttaaaaaa
tgggtgccttggatgattccaggctttgttttggttaatattttccttttcatgataaca
atgtacattaataattgtcccaagaactcgaagaaatgtgtggggagcttcctgggcagg
ttctcgtttcagcccttcaaagagaatcccctacttggcccttcttcttctacattagag
aaaatgggtgctcttgaagtgtctaaagttgtcaaaagtcgtcaagcatggcgcatgatt
tcttgtatatggttgcatgctggtgttttccacatacttgcgaacatgttgagtctttta
ttcattggaattcgactcgagcaggaattcgggtttgtgagaatcgggatgctttatctg
atcgctggtttcggtgggagtatactgtcatctctttttattcagaccggtatatcggtt
ggtgcctctggtgcactttttggttttctaggaagcatgctctcagaactaatcacaaac
tggacaatatattcaaataagtttgcagcgttgttaactcttgttttggttatcgtaata
aatctagctatgggaatcctcccacacgtggataactttgctcacatcggaggatttatc
tccggcttcctcctcggtttcgtgttcctaatccgtccccaatttggatatgttagtcag
aaaaaggttcctccaggatacattgcaccttctcgtaaacctaaacataagacataccag
tacgtcttgtgggtctgttctctgatactattgattgcaggattcgccattggcctagta
cttctccttcgaggggttaacttgaatgaacactgttcttggtgtcattatatgagttgt
atcccgacgccattgtggagctgcaaaaaccgacaagtgtattgtcagtcgaccgagttc
gggaaatcgttgaacttgacatgcataagcaatgggaaaagcgaaatctatccgttaaca
gaggaaaacacttcccaagttcaacaactatgttctaagctctgtggttga
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