KEGG   Gossypium hirsutum (upland cotton): 107951030
Entry
107951030         CDS       T04793                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107951030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107951030
Spliceosome [BR:ghi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107951030
 Complex B
    107951030
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 Tachystatin_B
Other DBs
NCBI-GeneID: 107951030
NCBI-ProteinID: XP_016741410
UniProt: A0A1U8NRE7
LinkDB
Position
A08:10776271..10777645
AA seq 282 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKVIGREL
RRKLFGRHRRYRGSRSRSRSASPRHRREREYREKSRDRDRDDDRDRNGRRPDRDRDRYDR
ESGSRRKHGSPRRSRSPPPAREGSEERRARIEQWNREREEKV
NT seq 849 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcctcaatctttggtacggagaaggaccgcgtgaattgccccttc
tatttcaagattggagcatgccggcacggggacaggtgttcacggctccacaaccggccg
acgatctctccgactctcctcctttccaacatgtaccagcgcccggacatgatcactccc
ggagtggatgcccagggccagcccatcgatccccgcaagatccaggagcacttcgaggac
ttctacgaggacatcttcgaggagctcagcaagtttggtgagatcgagagcctcaacgtt
tgtgacaacctcgccgaccacatgattggaaacgtgtatgttcagttcagggaggaagac
caggccgcagctgccctccaggctcttcaaggaaggttctactctggtcgtcctatcatt
gcggatttttccccggtcaccgatttccgcgaagcaacttgtcggcaatacgaggagaat
agctgtaaccgtgggggatactgtaactttatgcatgtcaaggtaattggaagggagctg
agaaggaagctgtttgggaggcaccgcaggtatagagggagtcggagcaggagtaggagc
gccagtcctcgccaccggcgtgagagggaatatagggaaaagtctcgagatcgagaccga
gatgatgatcgtgatagaaatgggcgaagaccggatagggatagggataggtatgaccgt
gaaagcgggagtaggagaaagcatgggagtcctaggcgaagcagaagccctccacctgct
agggaaggaagtgaggagcggagagccaggattgaacaatggaaccgtgagagggaagag
aaggtgtaa

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