Gossypium hirsutum (upland cotton): 107951068
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Entry
107951068 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107951068 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107951068
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
107951068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_At1g61320_AtMIF1
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
107951068
NCBI-ProteinID:
XP_016741455
UniProt:
A0A1U8NRJ3
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Position
A06:20249401..20253039
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AA seq
743 aa
AA seq
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MPVLRSREILPVQPKPLKARANIDPPATPTQGREQPATRSSPPSLIPSPKTLGSVSGSAP
ILRRSLRLSTRASSNAGQDGVLEAEEPIERRNGDVSRKRKLSADNDVGLESGEDEGVLSL
RSGKRVTKKGPFGDGNGSEGDVEVEIDRKGKSMLVEESEDTEKPERSKERVNVKGKRRYS
REEKGKGKLLVESALESKDESLVDGSVSDVELLAQEVNLSNEKPSKKNNRRTSQGRMERF
RDTARENASRFAHFSTQEEDDNILSTEAESEIPSEEPEEKGVEDWPGPFSTAMKIIRDRA
ANFNVRQGSSSSDKVQYLQIKWVPQKGKRKDWSKRLPPSLLDLSLRVLVDNADAIASLAH
VPDALRHKLCHMLCDSRRMNSNFFDLLLNGSPIEIRLKDCSWLTEEQFNQCFEKCDTINL
TILQLDYCGHCLADYNLPSTLARSPNSLPALTTLSLTGAYRLSDAGLSALVSSAPALRSV
NLSQCSFLTHSAIDILATSLASVLLELFIDDCQSIDAMLVLPSLKKLEHLEVLSVAGLES
VTDSFIKEFLIARGDGIKELILMDCWKLTDSSLKIIAETCSNLRALDIGNISKLTDTSFG
YLASGCRSLQSLKLCRNAFSDDAIAAFLEMSGEVLKELALNNVGKVGLNTALSLARRSRN
LVSLDLSWCRNLTDEAMGLIVDSCLSLRVLKLFGCSQITDVFLYGHSNAKVEIIGLKLSP
LLEHIKTPAQGPLQYSSVSVGCQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcctaagatcccgcgaaatccttccggtccaacccaagcccctaaaagctcgg
gccaatatcgacccgcccgccactcccacgcaaggccgcgaacaacccgccactcgttca
tcgccgccttcactcattccctcccctaaaactcttggttcagtttccggttccgcaccc
atacttcggcggagccttcgtctttctacgagagcttcgtccaatgccggccaggatggt
gttttggaggcggaggaacctatcgaacgacgaaacggtgacgtttcgagaaagaggaag
ttgagtgccgataacgatgtcggtttggagagcggcgaggatgaaggggtattgagtttg
cggtcggggaagagggttactaagaagggtccatttggcgacggcaacggcagcgaaggc
gatgtagaggttgaaattgacaggaaaggtaaaagcatgttagtggaagagagtgaagat
actgagaaaccggaaagaagcaaggagagagtgaatgtgaagggaaaaaggagatatagt
agagaagagaaagggaaggggaaattgcttgtagaaagtgctttggaatctaaagatgag
agtttagttgacggttcagtttccgacgttgaacttctagcacaggaagtgaatttgtcc
aatgaaaagccaagtaagaagaataataggagaacaagtcaggggagaatggagcggttt
cgagatacggctagggaaaatgcttctcgatttgcccatttcagcacccaggaagaagat
gataacattttatcaacggaggctgaaagcgaaattccgtccgaagaacctgaagaaaag
ggtgttgaagattggccgggtcctttctctactgctatgaagattataagggatagagca
gcgaattttaacgtaagacaggggagttcttcctcggacaaggtacagtacttacaaatt
aagtgggttcctcaaaagggtaaaagaaaagactggtcaaagcggctgcctccatcattg
cttgatttgagcttgagggttcttgtcgataatgcagatgcgattgcttcgcttgctcat
gtgcctgatgctctgagacacaagctctgtcatatgctctgtgactcgaggcgaatgaat
agtaacttttttgatctccttcttaacggatcccctatcgaaattcgcctcaaagattgt
tcatggctaactgaggaacagttcaatcaatgttttgaaaagtgtgacactatcaacttg
acgattctccaacttgattactgtggccactgcttagcggattataatttaccttctacc
ttagctcggtcgccgaacagcttgcctgcactaaccactttgtcattgactggtgcatat
cgtctttcggatgctgggcttagtgctcttgtttcttctgcccctgcattacgatctgta
aatctcagccagtgttcatttcttacccacagcgctattgacattttagctacctccttg
gcatcagttctactggaactatttatcgatgattgccaaagtattgatgcaatgctggtt
ctgccatcattgaagaagctggagcatttggaagtgttgtcagtagcagggttggagtct
gtaactgatagttttatcaaggaatttcttattgcaagaggcgatggtatcaaggaactg
attttgatggattgttggaaattaactgattcttccttgaaaatcattgcggaaacctgt
tcaaatttacgagcacttgacattggtaacatatccaaactgacagacacttctttcggc
tacctggccagtggttgtcggtcattgcagtcattgaaactctgccgcaatgcattcagt
gatgatgctatagctgcatttcttgaaatgtctggggaggttttgaaagagctagcactg
aacaatgttgggaaggttggtcttaatacagccttatcacttgcgaggcgttcaagaaat
ctggttagtctggatctatcttggtgccgaaatctgactgatgaagctatgggcttgatt
gtagatagctgtttatcgctgagggtgcttaaactttttggatgctctcagattacagac
gtctttttgtatggccattctaatgccaaggtagaaatcattggtttgaagttgtctcca
ttactggaacatatcaaaacaccagctcagggtccattgcagtactcttcagtatcagtt
gggtgtcagtga
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