Gossypium hirsutum (upland cotton): 107951188
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Entry
107951188 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107951188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107951188
03036 Chromosome and associated proteins [BR:
ghi03036
]
107951188
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107951188
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107951188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107951188
NCBI-ProteinID:
XP_016741616
UniProt:
A0A1U8NRK4
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All DBs
Position
A02:complement(41917094..41925843)
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AA seq
1013 aa
AA seq
DB search
MFGTTNPFGQSSSSPFASQSVFGQTSASSNPFAPKPSFSSPNPFGSQTGGSVFGGTSTGV
FGAAQSSSPFSSTTAFGASSSPAFGSSTPTFGSSSSSFGGSSVFGQKPAFGFGSSPTQSN
PFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPAFGATSTPAFGASSTPG
FGATSTPAFGASSTPAFDATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSSP
AFGTSATPAFGASSSAFGGSSTPAFGASSTPSFSFGSSPAFGQSTPAFGSSPFGTTSFGA
QSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGSGQPGAKLGSISAMP
VYKDKSHEELRWEDYQLGDKGGLQPAAQATGGIGFGASPVSTNPFGSSTFGQTSANPFSS
SSTNPFSLKPPSFNSTGFATSTTTSNPFQPTSSSLFGQASSTSLFSSSSTPTFGTGSSLF
GSSVTPFSSSPSIFGTGAAPATTSAFAPGINFGSSQTSPLFNSSPAIGQTGNAFGQMTST
FGQNTSNFGQTSIFNTPSTGFSGNMFSSSLSLAPSSNPAAFGPTTPSFASPFQPAQTGGA
FSFSNFGQTQPGGGSGIFGQNNIGLSYVSATQTAAVVQPGTIINPYSTLPAMPQMSIGQA
GTAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRLPARKYYPNNNGPKVPFFNND
EETPNTPKADAGFIPRESPRALIIRPTESWPSRASAEKASPLKVTSAAVHENGKISDDSS
DTGDKNENPAENGHVKERIHPVKGNQKANGVHDDHSAQKESCMTLNGHRAGEAAIVYEHG
ADIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRHGYGSIKFLGETDVR
RLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTDGPKIE
KYKEMLKRKAKDQGAEFISYDPIKGEWKFRVNHFSRYKLEDEDGVKMWGVADS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaatccttttgggcaatcatcaagtagcccatttgcatcccaatct
gtttttgggcagaccagtgcaagtagcaatccatttgcacctaaaccttccttcagtagt
ccaaacccttttggttcccaaacagggggttcggtatttggaggtacttctactggagtg
tttggtgcggcccaatcttcttctcccttctcctcaacaactgcctttggtgcctcttca
tctccagcttttggttcatctactcccacttttggcagttcatcatcatcttttggtggg
tcttctgtttttggtcagaagcctgcatttggctttgggtcaagtcccacccaatcaaat
ccttttggaagcacaaatcagcaatcacaacctgcatttggtagtggtatatttggttcc
tccacaccgtttggttcaactcagtcagcgtttggttctagtcctgcctttggttccact
agtagcccggcttttggtgcgacaagcacccctgcgtttggcgcctcaagcactccaggt
ttcggtgccacaagcacccctgcgtttggtgcctcaagtacccccgcatttgatgccacg
agcacccctgcatttggttcaactggaagtccagcatttgggagcactggaactgcattt
ggtgtgtctaatgccccagtttttggaactggaggtacatttggggcatcaagctcacct
gcgtttggcacttccgcaactcctgcttttggagcttcaagttctgcttttgggggttca
agcactcctgcttttggagcatcttctactccatcgttcagctttgggtctagcccagct
tttggccaatcaacgccagcatttggtagtagtccatttggaacaacctcatttggagcc
cagagttctcctttcggaagtcaatcttctgccccagcatttggaagcactagtctcggc
cagtctccttttggaggtcaacgtgggggaagtagagtagctccttacacacctacaact
gatgcagatagtgggagtggacagccaggtgcaaagttggggtcaatttcagcaatgcct
gtttataaagataaaagtcacgaggagctgagatgggaggattatcaattaggagataaa
ggtggactgcagccagctgctcaggctactggagggattgggtttggtgcgtcacctgta
tctacaaatcctttcggttcttcaacatttggccaaacatctgcaaatcctttttccagc
tcaagtaccaacccatttagtttaaaacctccatccttcaatagtacaggttttgcaacc
tcgactactacatcaaacccctttcaaccaacatcatcaagcctttttggtcaagcttct
tcaacttcattatttagttcatcatctactcctacatttggaaccggttcatctcttttt
ggctcatctgtcactccattttcatcttcaccgtccatttttggtactggtgcagctcca
gcaacaacttcagcatttgccccaggcataaattttggcagcagtcagacatcacctctg
ttcaattcttcccctgcaattggacagacaggcaatgcttttggccagatgacctctacc
tttggacagaatactagtaacttcggtcaaacaagcattttcaacacaccttccactgga
tttagtgggaatatgttttcaagctcactatcattggctccttctagcaacccagcggcc
ttcggcccaacaactccttcttttgcttcaccttttcaaccagctcagaccggtggtgct
ttcagctttagcaattttggtcagacacaacctggtggtggatctggcatttttggtcag
aataatattggcctatcgtatgtgtctgctacacagactgctgctgtagtacaaccaggg
actattataaacccctacagtacactccctgcaatgcctcaaatgtcaattggtcaggct
gggactgcaccgtcggttcagtatggaatttccagcatgcctgtggtggacaaacctgct
cctgctagaatatcgcctttattgacttctcggtacctttcccaaaggcggattaggttg
cctgcaaggaaatattatcctaataataatggtccaaaggttccatttttcaataatgat
gaagagacacccaacacacctaaggctgatgccggttttatccctagggaaagtccaagg
gctttgatcattcgtcccacagaaagttggccttcaagagcttctgctgagaaggcatct
ccattgaaggttacatccgctgctgtgcatgagaatggcaaaatttctgatgatagctcc
gacactggggataaaaatgaaaatccagccgaaaatggccatgtgaaggagcgaattcac
ccagtcaaaggtaaccagaaagctaatggagtccatgacgatcattctgctcagaaagag
tcatgcatgacactcaatggccacagagcaggtgaggctgctattgtctacgagcacggg
gcagacattgaggctttaatgccaaagcttaggcggtctgattactatacagaacctcga
atccaagaactggctgcaaaggaaagggctgaaccagggtactgtcggcatgtcaaggat
tttgtggttggacggcacggttacggaagcatcaagttcctgggtgagacagatgtgaga
cgtcttgatttggagtcccttgtgcagttcaacaaccgcgaggtaatagtttacatggat
gatagcaagaaacctcctgttggacaaggtctcaataagcctgcagaggtaacacttctt
aacatcaagtgtttcgataaaaagacaggacagcagtacacagatggtccaaaaatcgag
aaatataaggaaatgcttaaaaggaaagccaaggaccaaggagctgaatttatttcctac
gatcccatcaaaggagagtggaaattcagggttaatcacttcagcaggtataagttggaa
gatgaagatggtgtcaaaatgtggggtgttgcagatagctga
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