Gossypium hirsutum (upland cotton): 107951250
Help
Entry
107951250 CDS
T04793
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107951250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107951250
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107951250
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107951250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107951250
NCBI-ProteinID:
XP_016741722
UniProt:
A0A1U8NS98
A0ABM2Z8Y0
LinkDB
All DBs
Position
D12:53229449..53233517
Genome browser
AA seq
539 aa
AA seq
DB search
MELCFGWFLLVASIPAIFAQDISHGSIVVDGTMTVAQTDDNFVCATIDWWPHDKCNYDQC
PWHHTSVMNLNLSHPFLAKAIQAFNRLRIRVGGSLQDQVLYDVGNLKSPCHPFQKMKDGL
FGFSKGCLHMERWDELNRFFKETSAMVTFGLNALHGRHKIKRSLWGGDWDSSNAQDFMKY
TISKGYQIDSWEFGNELSGNGIGAHVHADQYGKDLVNLRKIINELYKGSQSKPSLIAPGG
FYDEEWFVKLLQTSGFGVIDVMSHHMYNLGAGVDPKLVSKILNPDHLNKAAYTFGNLTHI
IRRHGPWTSAWVGESGGAYNSGGAHVSNTFVNSFWYLDQLGMASKYHTKVYCRQTLIGGN
YGLLNATTFVPNPDYYSGLLWHRLMGKVVLNVESHASPFLRSYAHCSKGRAGVTLLVINL
SNQTNFIMNAQNSINLKLAANEQNISRDSFTHNLKKTFSWVGTKASDDALLREEYHLTPK
DGYLRSQTMVLNGIPLELTSTGDIPSLNPVRVNVKSPITISPLSIAFIVFPNFEAPACR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtgcttcggttggttcttacttgtggcttcgattcctgcaatttttgctcaa
gatattagtcatggatcgattgtagttgatggaactatgactgttgctcaaactgatgat
aacttcgtctgtgctacgatcgactggtggcctcatgataagtgtaattacgaccagtgt
ccatggcaccatacatctgtaatgaatctgaacttgtctcatcctttccttgccaaagct
atccaagctttcaaccgtttgaggataagagttggaggctctttgcaagatcaagtgttg
tatgatgttgggaatttaaagtccccttgtcatccattccaaaagatgaaagacggattg
tttgggttttcaaagggatgcttacacatggagaggtgggatgaactgaaccgtttcttc
aaagaaaccagtgcaatggtgacattcggcctgaatgctctccatgggagacataaaata
aagaggagcctttggggaggggattgggactctagcaatgcgcaagattttatgaagtac
accatttcaaagggataccagatagattcatgggaattcggtaatgagttgagcggaaat
ggtattggtgcacatgttcatgccgaccagtatggaaaagacttggtcaacctaaggaaa
atcataaatgagttatacaaaggctcgcaatctaaaccatcactcatagctcccggagga
ttctatgacgaagagtggtttgtcaagcttcttcagacctcgggctttggtgtaatcgat
gtcatgagccatcatatgtacaatttgggtgcaggtgttgatccgaaacttgttagtaaa
atattgaatccggaccacttaaataaggcagcatacactttcggtaatctcacacacatc
atccggaggcacggtccttggacttctgcatgggttggagagtctggtggggcttataac
agcggtggtgctcatgtgtccaatacattcgtcaacagcttctggtatttagatcagctc
ggaatggcatcaaaataccatactaaagtatattgtaggcaaacactaattggtggcaac
tatggtcttctcaatgcgacaacatttgttccgaaccctgattattacagtggacttcta
tggcatcggttaatgggtaaagtggttctaaatgtcgaaagccatgcttcgccctttctt
cgatcttatgcccattgttcgaaaggaagagctggtgtaactttactcgtgatcaacttg
agcaatcagacgaatttcataatgaatgctcaaaacagcatcaatctgaagttggctgcc
aatgaacaaaacattagcagggacagcttcacacataatcttaagaaaacattctcctgg
gtcggaaccaaagcttccgatgatgctctactccgagaagagtatcatttaacaccaaaa
gacggataccttagaagtcaaactatggttctaaatggcattcctttagaacttacaagc
accggagacatcccatcactaaaccccgtccgtgttaacgtgaagtctccgataaccatc
tcgcctttgtcaattgcattcatagtattccccaacttcgaagctccagcttgcaggtaa
DBGET
integrated database retrieval system
